Protein–RNA interactions for Protein: Q9Z1L4

Rs1, Retinoschisin, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rs1Q9Z1L4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rs1Q9Z1L4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rs1Q9Z1L4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.09■□□□□ 0.65
Rs1Q9Z1L4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rs1Q9Z1L4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rs1Q9Z1L4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rs1Q9Z1L4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rs1Q9Z1L4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rs1Q9Z1L4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rs1Q9Z1L4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rs1Q9Z1L4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rs1Q9Z1L4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rs1Q9Z1L4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rs1Q9Z1L4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.03■□□□□ 0.64
Rs1Q9Z1L4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.02■□□□□ 0.64
Rs1Q9Z1L4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.01■□□□□ 0.63
Rs1Q9Z1L4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rs1Q9Z1L4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rs1Q9Z1L4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rs1Q9Z1L4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.97■□□□□ 0.63
Rs1Q9Z1L4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rs1Q9Z1L4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Rs1Q9Z1L4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rs1Q9Z1L4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rs1Q9Z1L4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rs1Q9Z1L4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rs1Q9Z1L4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Rs1Q9Z1L4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.95■□□□□ 0.62
Rs1Q9Z1L4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Rs1Q9Z1L4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rs1Q9Z1L4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rs1Q9Z1L4 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.94■□□□□ 0.62
Rs1Q9Z1L4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rs1Q9Z1L4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rs1Q9Z1L4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Rs1Q9Z1L4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rs1Q9Z1L4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rs1Q9Z1L4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rs1Q9Z1L4 Gm27322-201ENSMUST00000184007 104 ntBASIC18.91■□□□□ 0.62
Rs1Q9Z1L4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.91■□□□□ 0.62
Rs1Q9Z1L4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Rs1Q9Z1L4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rs1Q9Z1L4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rs1Q9Z1L4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rs1Q9Z1L4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
Rs1Q9Z1L4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rs1Q9Z1L4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rs1Q9Z1L4 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.87■□□□□ 0.61
Rs1Q9Z1L4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rs1Q9Z1L4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rs1Q9Z1L4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rs1Q9Z1L4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.86■□□□□ 0.61
Rs1Q9Z1L4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rs1Q9Z1L4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rs1Q9Z1L4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rs1Q9Z1L4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rs1Q9Z1L4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rs1Q9Z1L4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rs1Q9Z1L4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rs1Q9Z1L4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.81■□□□□ 0.6
Rs1Q9Z1L4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rs1Q9Z1L4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Rs1Q9Z1L4 Gm26115-201ENSMUST00000175605 87 ntBASIC18.8■□□□□ 0.6
Rs1Q9Z1L4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rs1Q9Z1L4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rs1Q9Z1L4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rs1Q9Z1L4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rs1Q9Z1L4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rs1Q9Z1L4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rs1Q9Z1L4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rs1Q9Z1L4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rs1Q9Z1L4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rs1Q9Z1L4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.74■□□□□ 0.59
Rs1Q9Z1L4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rs1Q9Z1L4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rs1Q9Z1L4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rs1Q9Z1L4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rs1Q9Z1L4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rs1Q9Z1L4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rs1Q9Z1L4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rs1Q9Z1L4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rs1Q9Z1L4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rs1Q9Z1L4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rs1Q9Z1L4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rs1Q9Z1L4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rs1Q9Z1L4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rs1Q9Z1L4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rs1Q9Z1L4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rs1Q9Z1L4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rs1Q9Z1L4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rs1Q9Z1L4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rs1Q9Z1L4 Gm8109-201ENSMUST00000194076 746 ntBASIC18.66■□□□□ 0.58
Rs1Q9Z1L4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rs1Q9Z1L4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Rs1Q9Z1L4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rs1Q9Z1L4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rs1Q9Z1L4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rs1Q9Z1L4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rs1Q9Z1L4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rs1Q9Z1L4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms