Protein–RNA interactions for Protein: Q9WVK8

Cyp46a1, Cholesterol 24-hydroxylase, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cyp46a1Q9WVK8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Cyp46a1Q9WVK8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC32.28■■■□□ 2.76
Cyp46a1Q9WVK8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC32.24■■■□□ 2.75
Cyp46a1Q9WVK8 Gm6658-202ENSMUST00000209493 1885 ntBASIC32.23■■■□□ 2.75
Cyp46a1Q9WVK8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Cyp46a1Q9WVK8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Cyp46a1Q9WVK8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Cyp46a1Q9WVK8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
Cyp46a1Q9WVK8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC32.15■■■□□ 2.74
Cyp46a1Q9WVK8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
Cyp46a1Q9WVK8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Cyp46a1Q9WVK8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Cyp46a1Q9WVK8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Cyp46a1Q9WVK8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
Cyp46a1Q9WVK8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Cyp46a1Q9WVK8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.72
Cyp46a1Q9WVK8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Cyp46a1Q9WVK8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Cyp46a1Q9WVK8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32■■■□□ 2.71
Cyp46a1Q9WVK8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Cyp46a1Q9WVK8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Cyp46a1Q9WVK8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Cyp46a1Q9WVK8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Cyp46a1Q9WVK8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Cyp46a1Q9WVK8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
Cyp46a1Q9WVK8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Cyp46a1Q9WVK8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Cyp46a1Q9WVK8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Cyp46a1Q9WVK8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Cyp46a1Q9WVK8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
Cyp46a1Q9WVK8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Cyp46a1Q9WVK8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Cyp46a1Q9WVK8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Cyp46a1Q9WVK8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Cyp46a1Q9WVK8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Cyp46a1Q9WVK8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Cyp46a1Q9WVK8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Cyp46a1Q9WVK8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Cyp46a1Q9WVK8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.74■■■□□ 2.67
Cyp46a1Q9WVK8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Cyp46a1Q9WVK8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.73■■■□□ 2.67
Cyp46a1Q9WVK8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Cyp46a1Q9WVK8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Cyp46a1Q9WVK8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Cyp46a1Q9WVK8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Cyp46a1Q9WVK8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Cyp46a1Q9WVK8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.66■■■□□ 2.66
Cyp46a1Q9WVK8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Cyp46a1Q9WVK8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Cyp46a1Q9WVK8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC31.63■■■□□ 2.65
Cyp46a1Q9WVK8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.63■■■□□ 2.65
Cyp46a1Q9WVK8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Cyp46a1Q9WVK8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
Cyp46a1Q9WVK8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
Cyp46a1Q9WVK8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Cyp46a1Q9WVK8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC31.59■■■□□ 2.65
Cyp46a1Q9WVK8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.59■■■□□ 2.65
Cyp46a1Q9WVK8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Cyp46a1Q9WVK8 Peli2-204ENSMUST00000226513 1320 ntBASIC31.57■■■□□ 2.64
Cyp46a1Q9WVK8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Cyp46a1Q9WVK8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Cyp46a1Q9WVK8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Cyp46a1Q9WVK8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
Cyp46a1Q9WVK8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.52■■■□□ 2.64
Cyp46a1Q9WVK8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Cyp46a1Q9WVK8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
Cyp46a1Q9WVK8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Cyp46a1Q9WVK8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Cyp46a1Q9WVK8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Cyp46a1Q9WVK8 Gm24804-201ENSMUST00000174982 85 ntBASIC31.45■■■□□ 2.63
Cyp46a1Q9WVK8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Cyp46a1Q9WVK8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Cyp46a1Q9WVK8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.44■■■□□ 2.62
Cyp46a1Q9WVK8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
Cyp46a1Q9WVK8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.44■■■□□ 2.62
Cyp46a1Q9WVK8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cyp46a1Q9WVK8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cyp46a1Q9WVK8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.4■■■□□ 2.62
Cyp46a1Q9WVK8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cyp46a1Q9WVK8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Cyp46a1Q9WVK8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Cyp46a1Q9WVK8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Cyp46a1Q9WVK8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Cyp46a1Q9WVK8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Cyp46a1Q9WVK8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
Cyp46a1Q9WVK8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
Cyp46a1Q9WVK8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.35■■■□□ 2.61
Cyp46a1Q9WVK8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.32■■■□□ 2.61
Cyp46a1Q9WVK8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Cyp46a1Q9WVK8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Cyp46a1Q9WVK8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cyp46a1Q9WVK8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cyp46a1Q9WVK8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Cyp46a1Q9WVK8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cyp46a1Q9WVK8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.29■■■□□ 2.6
Cyp46a1Q9WVK8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Cyp46a1Q9WVK8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
Cyp46a1Q9WVK8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cyp46a1Q9WVK8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cyp46a1Q9WVK8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms