Protein–RNA interactions for Protein: Q9EQJ0

Tpcn1, Two pore calcium channel protein 1, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpcn1Q9EQJ0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Tpcn1Q9EQJ0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Tpcn1Q9EQJ0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
Tpcn1Q9EQJ0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.67■■■□□ 2.18
Tpcn1Q9EQJ0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Tpcn1Q9EQJ0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Tpcn1Q9EQJ0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
Tpcn1Q9EQJ0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.17
Tpcn1Q9EQJ0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Tpcn1Q9EQJ0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.62■■■□□ 2.17
Tpcn1Q9EQJ0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Tpcn1Q9EQJ0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Tpcn1Q9EQJ0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Tpcn1Q9EQJ0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Tpcn1Q9EQJ0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Tpcn1Q9EQJ0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Tpcn1Q9EQJ0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Tpcn1Q9EQJ0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Tpcn1Q9EQJ0 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.53■■■□□ 2.16
Tpcn1Q9EQJ0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Tpcn1Q9EQJ0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Tpcn1Q9EQJ0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Tpcn1Q9EQJ0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Tpcn1Q9EQJ0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Tpcn1Q9EQJ0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Tpcn1Q9EQJ0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Tpcn1Q9EQJ0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Tpcn1Q9EQJ0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
Tpcn1Q9EQJ0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Tpcn1Q9EQJ0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Tpcn1Q9EQJ0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.36■■■□□ 2.13
Tpcn1Q9EQJ0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Tpcn1Q9EQJ0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.33■■■□□ 2.13
Tpcn1Q9EQJ0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Tpcn1Q9EQJ0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Tpcn1Q9EQJ0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Tpcn1Q9EQJ0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Tpcn1Q9EQJ0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Tpcn1Q9EQJ0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Tpcn1Q9EQJ0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Tpcn1Q9EQJ0 Zfp131-205ENSMUST00000223812 663 ntBASIC28.28■■■□□ 2.12
Tpcn1Q9EQJ0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Tpcn1Q9EQJ0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.25■■■□□ 2.11
Tpcn1Q9EQJ0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Tpcn1Q9EQJ0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
Tpcn1Q9EQJ0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Tpcn1Q9EQJ0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Tpcn1Q9EQJ0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.2■■■□□ 2.11
Tpcn1Q9EQJ0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Tpcn1Q9EQJ0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
Tpcn1Q9EQJ0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Tpcn1Q9EQJ0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Tpcn1Q9EQJ0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Tpcn1Q9EQJ0 Mipep-204ENSMUST00000225043 1548 ntBASIC28.16■■■□□ 2.1
Tpcn1Q9EQJ0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Tpcn1Q9EQJ0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Tpcn1Q9EQJ0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Tpcn1Q9EQJ0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Tpcn1Q9EQJ0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Tpcn1Q9EQJ0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Tpcn1Q9EQJ0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Tpcn1Q9EQJ0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Tpcn1Q9EQJ0 Gm16148-201ENSMUST00000119653 893 ntBASIC28.1■■■□□ 2.09
Tpcn1Q9EQJ0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Tpcn1Q9EQJ0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Tpcn1Q9EQJ0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Tpcn1Q9EQJ0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Tpcn1Q9EQJ0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Tpcn1Q9EQJ0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
Tpcn1Q9EQJ0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.03■■■□□ 2.08
Tpcn1Q9EQJ0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Tpcn1Q9EQJ0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Tpcn1Q9EQJ0 Peli2-204ENSMUST00000226513 1320 ntBASIC28.02■■■□□ 2.08
Tpcn1Q9EQJ0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.08
Tpcn1Q9EQJ0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.01■■■□□ 2.07
Tpcn1Q9EQJ0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
Tpcn1Q9EQJ0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.99■■■□□ 2.07
Tpcn1Q9EQJ0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
Tpcn1Q9EQJ0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
Tpcn1Q9EQJ0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Tpcn1Q9EQJ0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Tpcn1Q9EQJ0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.96■■■□□ 2.07
Tpcn1Q9EQJ0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.96■■■□□ 2.07
Tpcn1Q9EQJ0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Tpcn1Q9EQJ0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Tpcn1Q9EQJ0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.92■■■□□ 2.06
Tpcn1Q9EQJ0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Tpcn1Q9EQJ0 Zxda-201ENSMUST00000117281 2621 ntBASIC27.89■■■□□ 2.06
Tpcn1Q9EQJ0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Tpcn1Q9EQJ0 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.88■■■□□ 2.05
Tpcn1Q9EQJ0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Tpcn1Q9EQJ0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Tpcn1Q9EQJ0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Tpcn1Q9EQJ0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Tpcn1Q9EQJ0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Tpcn1Q9EQJ0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.86■■■□□ 2.05
Tpcn1Q9EQJ0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Tpcn1Q9EQJ0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Tpcn1Q9EQJ0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Tpcn1Q9EQJ0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms