Protein–RNA interactions for Protein: Q9D8D0

Tnfrsf13c, Tumor necrosis factor receptor superfamily member 13C, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13cQ9D8D0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf13cQ9D8D0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf13cQ9D8D0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnfrsf13cQ9D8D0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf13cQ9D8D0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tnfrsf13cQ9D8D0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.96■□□□□ 0.79
Tnfrsf13cQ9D8D0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf13cQ9D8D0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf13cQ9D8D0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf13cQ9D8D0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf13cQ9D8D0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Tnfrsf13cQ9D8D0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfrsf13cQ9D8D0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf13cQ9D8D0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf13cQ9D8D0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf13cQ9D8D0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Tnfrsf13cQ9D8D0 Rab21-202ENSMUST00000218831 843 ntBASIC19.92■□□□□ 0.78
Tnfrsf13cQ9D8D0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf13cQ9D8D0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf13cQ9D8D0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.91■□□□□ 0.78
Tnfrsf13cQ9D8D0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf13cQ9D8D0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.9■□□□□ 0.78
Tnfrsf13cQ9D8D0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf13cQ9D8D0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf13cQ9D8D0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfrsf13cQ9D8D0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf13cQ9D8D0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf13cQ9D8D0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.87■□□□□ 0.77
Tnfrsf13cQ9D8D0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfrsf13cQ9D8D0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfrsf13cQ9D8D0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
Tnfrsf13cQ9D8D0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf13cQ9D8D0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf13cQ9D8D0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfrsf13cQ9D8D0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Tnfrsf13cQ9D8D0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tnfrsf13cQ9D8D0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
Tnfrsf13cQ9D8D0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf13cQ9D8D0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf13cQ9D8D0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf13cQ9D8D0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf13cQ9D8D0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf13cQ9D8D0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfrsf13cQ9D8D0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Tnfrsf13cQ9D8D0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Tnfrsf13cQ9D8D0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.76■□□□□ 0.75
Tnfrsf13cQ9D8D0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf13cQ9D8D0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf13cQ9D8D0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf13cQ9D8D0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Tnfrsf13cQ9D8D0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf13cQ9D8D0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf13cQ9D8D0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf13cQ9D8D0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf13cQ9D8D0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Tnfrsf13cQ9D8D0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Tnfrsf13cQ9D8D0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf13cQ9D8D0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf13cQ9D8D0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf13cQ9D8D0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf13cQ9D8D0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf13cQ9D8D0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf13cQ9D8D0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf13cQ9D8D0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf13cQ9D8D0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Tnfrsf13cQ9D8D0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Tnfrsf13cQ9D8D0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf13cQ9D8D0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf13cQ9D8D0 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.65■□□□□ 0.74
Tnfrsf13cQ9D8D0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf13cQ9D8D0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf13cQ9D8D0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf13cQ9D8D0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf13cQ9D8D0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf13cQ9D8D0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf13cQ9D8D0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf13cQ9D8D0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf13cQ9D8D0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Tnfrsf13cQ9D8D0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf13cQ9D8D0 Mipep-204ENSMUST00000225043 1548 ntBASIC19.6■□□□□ 0.73
Tnfrsf13cQ9D8D0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf13cQ9D8D0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Tnfrsf13cQ9D8D0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tnfrsf13cQ9D8D0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf13cQ9D8D0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Tnfrsf13cQ9D8D0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Tnfrsf13cQ9D8D0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.56■□□□□ 0.72
Tnfrsf13cQ9D8D0 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.55■□□□□ 0.72
Tnfrsf13cQ9D8D0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf13cQ9D8D0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf13cQ9D8D0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf13cQ9D8D0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.52■□□□□ 0.72
Tnfrsf13cQ9D8D0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf13cQ9D8D0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tnfrsf13cQ9D8D0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tnfrsf13cQ9D8D0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf13cQ9D8D0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf13cQ9D8D0 Amer2-203ENSMUST00000225247 2662 ntBASIC19.51■□□□□ 0.71
Tnfrsf13cQ9D8D0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf13cQ9D8D0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms