Protein–RNA interactions for Protein: Q9CQL6

Mrpl35, 39S ribosomal protein L35, mitochondrial, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl35Q9CQL6 Gm24804-201ENSMUST00000174982 85 ntBASIC19.24■□□□□ 0.67
Mrpl35Q9CQL6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mrpl35Q9CQL6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mrpl35Q9CQL6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mrpl35Q9CQL6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl35Q9CQL6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.18■□□□□ 0.66
Mrpl35Q9CQL6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Mrpl35Q9CQL6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mrpl35Q9CQL6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.16■□□□□ 0.66
Mrpl35Q9CQL6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mrpl35Q9CQL6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.13■□□□□ 0.65
Mrpl35Q9CQL6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mrpl35Q9CQL6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mrpl35Q9CQL6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mrpl35Q9CQL6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Mrpl35Q9CQL6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mrpl35Q9CQL6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mrpl35Q9CQL6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mrpl35Q9CQL6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Mrpl35Q9CQL6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mrpl35Q9CQL6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.1■□□□□ 0.65
Mrpl35Q9CQL6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Mrpl35Q9CQL6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Mrpl35Q9CQL6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Mrpl35Q9CQL6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Mrpl35Q9CQL6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.08■□□□□ 0.64
Mrpl35Q9CQL6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mrpl35Q9CQL6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Mrpl35Q9CQL6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Mrpl35Q9CQL6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mrpl35Q9CQL6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Mrpl35Q9CQL6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Mrpl35Q9CQL6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mrpl35Q9CQL6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mrpl35Q9CQL6 Peli2-204ENSMUST00000226513 1320 ntBASIC19■□□□□ 0.63
Mrpl35Q9CQL6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19■□□□□ 0.63
Mrpl35Q9CQL6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mrpl35Q9CQL6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Mrpl35Q9CQL6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mrpl35Q9CQL6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.97■□□□□ 0.63
Mrpl35Q9CQL6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Mrpl35Q9CQL6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mrpl35Q9CQL6 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.94■□□□□ 0.62
Mrpl35Q9CQL6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mrpl35Q9CQL6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.93■□□□□ 0.62
Mrpl35Q9CQL6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Mrpl35Q9CQL6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Mrpl35Q9CQL6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mrpl35Q9CQL6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mrpl35Q9CQL6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Mrpl35Q9CQL6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mrpl35Q9CQL6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mrpl35Q9CQL6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Mrpl35Q9CQL6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mrpl35Q9CQL6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mrpl35Q9CQL6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Mrpl35Q9CQL6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mrpl35Q9CQL6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mrpl35Q9CQL6 Gm16148-201ENSMUST00000119653 893 ntBASIC18.87■□□□□ 0.61
Mrpl35Q9CQL6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mrpl35Q9CQL6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mrpl35Q9CQL6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mrpl35Q9CQL6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mrpl35Q9CQL6 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.81■□□□□ 0.6
Mrpl35Q9CQL6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl35Q9CQL6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl35Q9CQL6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mrpl35Q9CQL6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl35Q9CQL6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.75■□□□□ 0.59
Mrpl35Q9CQL6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl35Q9CQL6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.74■□□□□ 0.59
Mrpl35Q9CQL6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl35Q9CQL6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.73■□□□□ 0.59
Mrpl35Q9CQL6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mrpl35Q9CQL6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mrpl35Q9CQL6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mrpl35Q9CQL6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mrpl35Q9CQL6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mrpl35Q9CQL6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Mrpl35Q9CQL6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Mrpl35Q9CQL6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Mrpl35Q9CQL6 Zfp131-205ENSMUST00000223812 663 ntBASIC18.69■□□□□ 0.58
Mrpl35Q9CQL6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mrpl35Q9CQL6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.67■□□□□ 0.58
Mrpl35Q9CQL6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mrpl35Q9CQL6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mrpl35Q9CQL6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Mrpl35Q9CQL6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mrpl35Q9CQL6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Mrpl35Q9CQL6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl35Q9CQL6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Mrpl35Q9CQL6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mrpl35Q9CQL6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mrpl35Q9CQL6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mrpl35Q9CQL6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Mrpl35Q9CQL6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mrpl35Q9CQL6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl35Q9CQL6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl35Q9CQL6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl35Q9CQL6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms