Protein–RNA interactions for Protein: Q9CQ91

Ndufa3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, mousemouse

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa3Q9CQ91 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndufa3Q9CQ91 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndufa3Q9CQ91 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ndufa3Q9CQ91 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ndufa3Q9CQ91 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ndufa3Q9CQ91 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ndufa3Q9CQ91 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ndufa3Q9CQ91 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.69■□□□□ 0.58
Ndufa3Q9CQ91 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ndufa3Q9CQ91 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndufa3Q9CQ91 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndufa3Q9CQ91 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.67■□□□□ 0.58
Ndufa3Q9CQ91 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndufa3Q9CQ91 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.66■□□□□ 0.58
Ndufa3Q9CQ91 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndufa3Q9CQ91 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndufa3Q9CQ91 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ndufa3Q9CQ91 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndufa3Q9CQ91 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ndufa3Q9CQ91 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ndufa3Q9CQ91 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ndufa3Q9CQ91 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ndufa3Q9CQ91 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ndufa3Q9CQ91 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.55■□□□□ 0.56
Ndufa3Q9CQ91 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.55■□□□□ 0.56
Ndufa3Q9CQ91 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.54■□□□□ 0.56
Ndufa3Q9CQ91 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ndufa3Q9CQ91 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ndufa3Q9CQ91 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ndufa3Q9CQ91 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndufa3Q9CQ91 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndufa3Q9CQ91 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ndufa3Q9CQ91 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ndufa3Q9CQ91 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ndufa3Q9CQ91 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ndufa3Q9CQ91 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ndufa3Q9CQ91 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ndufa3Q9CQ91 Zxda-201ENSMUST00000117281 2621 ntBASIC18.45■□□□□ 0.54
Ndufa3Q9CQ91 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ndufa3Q9CQ91 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ndufa3Q9CQ91 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ndufa3Q9CQ91 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ndufa3Q9CQ91 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ndufa3Q9CQ91 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Ndufa3Q9CQ91 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ndufa3Q9CQ91 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ndufa3Q9CQ91 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndufa3Q9CQ91 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufa3Q9CQ91 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufa3Q9CQ91 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufa3Q9CQ91 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufa3Q9CQ91 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.39■□□□□ 0.53
Ndufa3Q9CQ91 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndufa3Q9CQ91 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ndufa3Q9CQ91 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ndufa3Q9CQ91 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.38■□□□□ 0.53
Ndufa3Q9CQ91 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ndufa3Q9CQ91 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndufa3Q9CQ91 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ndufa3Q9CQ91 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ndufa3Q9CQ91 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndufa3Q9CQ91 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ndufa3Q9CQ91 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ndufa3Q9CQ91 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.35■□□□□ 0.53
Ndufa3Q9CQ91 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ndufa3Q9CQ91 Gm24804-201ENSMUST00000174982 85 ntBASIC18.32■□□□□ 0.52
Ndufa3Q9CQ91 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufa3Q9CQ91 Peli2-204ENSMUST00000226513 1320 ntBASIC18.3■□□□□ 0.52
Ndufa3Q9CQ91 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ndufa3Q9CQ91 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ndufa3Q9CQ91 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ndufa3Q9CQ91 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ndufa3Q9CQ91 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ndufa3Q9CQ91 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ndufa3Q9CQ91 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ndufa3Q9CQ91 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.25■□□□□ 0.51
Ndufa3Q9CQ91 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ndufa3Q9CQ91 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ndufa3Q9CQ91 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ndufa3Q9CQ91 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ndufa3Q9CQ91 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ndufa3Q9CQ91 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ndufa3Q9CQ91 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ndufa3Q9CQ91 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ndufa3Q9CQ91 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ndufa3Q9CQ91 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Ndufa3Q9CQ91 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ndufa3Q9CQ91 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ndufa3Q9CQ91 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ndufa3Q9CQ91 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ndufa3Q9CQ91 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Ndufa3Q9CQ91 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.17■□□□□ 0.5
Ndufa3Q9CQ91 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Ndufa3Q9CQ91 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ndufa3Q9CQ91 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ndufa3Q9CQ91 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ndufa3Q9CQ91 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ndufa3Q9CQ91 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Ndufa3Q9CQ91 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ndufa3Q9CQ91 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms