Protein–RNA interactions for Protein: Q99N09

Ms4a6b, Membrane-spanning 4-domains subfamily A member 6B, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ms4a6bQ99N09 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Ms4a6bQ99N09 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ms4a6bQ99N09 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ms4a6bQ99N09 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ms4a6bQ99N09 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ms4a6bQ99N09 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Ms4a6bQ99N09 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ms4a6bQ99N09 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ms4a6bQ99N09 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ms4a6bQ99N09 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.74■□□□□ 0.91
Ms4a6bQ99N09 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ms4a6bQ99N09 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ms4a6bQ99N09 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ms4a6bQ99N09 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ms4a6bQ99N09 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ms4a6bQ99N09 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.68■□□□□ 0.9
Ms4a6bQ99N09 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ms4a6bQ99N09 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ms4a6bQ99N09 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ms4a6bQ99N09 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ms4a6bQ99N09 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ms4a6bQ99N09 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ms4a6bQ99N09 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ms4a6bQ99N09 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.63■□□□□ 0.89
Ms4a6bQ99N09 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ms4a6bQ99N09 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ms4a6bQ99N09 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ms4a6bQ99N09 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.59■□□□□ 0.89
Ms4a6bQ99N09 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.58■□□□□ 0.89
Ms4a6bQ99N09 Mipep-204ENSMUST00000225043 1548 ntBASIC20.58■□□□□ 0.88
Ms4a6bQ99N09 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ms4a6bQ99N09 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ms4a6bQ99N09 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ms4a6bQ99N09 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ms4a6bQ99N09 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ms4a6bQ99N09 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.54■□□□□ 0.88
Ms4a6bQ99N09 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.54■□□□□ 0.88
Ms4a6bQ99N09 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ms4a6bQ99N09 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ms4a6bQ99N09 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ms4a6bQ99N09 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ms4a6bQ99N09 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.51■□□□□ 0.87
Ms4a6bQ99N09 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ms4a6bQ99N09 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ms4a6bQ99N09 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Ms4a6bQ99N09 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.46■□□□□ 0.87
Ms4a6bQ99N09 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ms4a6bQ99N09 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ms4a6bQ99N09 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ms4a6bQ99N09 Gm27322-201ENSMUST00000184007 104 ntBASIC20.44■□□□□ 0.86
Ms4a6bQ99N09 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ms4a6bQ99N09 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ms4a6bQ99N09 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.41■□□□□ 0.86
Ms4a6bQ99N09 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ms4a6bQ99N09 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Ms4a6bQ99N09 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ms4a6bQ99N09 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.38■□□□□ 0.85
Ms4a6bQ99N09 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.38■□□□□ 0.85
Ms4a6bQ99N09 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ms4a6bQ99N09 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ms4a6bQ99N09 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ms4a6bQ99N09 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
Ms4a6bQ99N09 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ms4a6bQ99N09 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ms4a6bQ99N09 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ms4a6bQ99N09 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.35■□□□□ 0.85
Ms4a6bQ99N09 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ms4a6bQ99N09 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ms4a6bQ99N09 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Ms4a6bQ99N09 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ms4a6bQ99N09 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ms4a6bQ99N09 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ms4a6bQ99N09 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ms4a6bQ99N09 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ms4a6bQ99N09 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ms4a6bQ99N09 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ms4a6bQ99N09 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ms4a6bQ99N09 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ms4a6bQ99N09 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Ms4a6bQ99N09 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ms4a6bQ99N09 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ms4a6bQ99N09 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ms4a6bQ99N09 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ms4a6bQ99N09 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Ms4a6bQ99N09 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ms4a6bQ99N09 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ms4a6bQ99N09 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ms4a6bQ99N09 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ms4a6bQ99N09 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.2■□□□□ 0.82
Ms4a6bQ99N09 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ms4a6bQ99N09 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ms4a6bQ99N09 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ms4a6bQ99N09 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ms4a6bQ99N09 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ms4a6bQ99N09 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.18■□□□□ 0.82
Ms4a6bQ99N09 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ms4a6bQ99N09 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ms4a6bQ99N09 Gm26115-201ENSMUST00000175605 87 ntBASIC20.17■□□□□ 0.82
Ms4a6bQ99N09 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ms4a6bQ99N09 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms