Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdha3Q91Y16 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Pcdha3Q91Y16 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.36■■□□□ 1.97
Pcdha3Q91Y16 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pcdha3Q91Y16 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pcdha3Q91Y16 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.34■■□□□ 1.97
Pcdha3Q91Y16 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Pcdha3Q91Y16 Gm24804-201ENSMUST00000174982 85 ntBASIC27.32■■□□□ 1.96
Pcdha3Q91Y16 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Pcdha3Q91Y16 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pcdha3Q91Y16 Mipep-204ENSMUST00000225043 1548 ntBASIC27.29■■□□□ 1.96
Pcdha3Q91Y16 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Pcdha3Q91Y16 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.27■■□□□ 1.96
Pcdha3Q91Y16 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Pcdha3Q91Y16 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pcdha3Q91Y16 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Pcdha3Q91Y16 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Pcdha3Q91Y16 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Pcdha3Q91Y16 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Pcdha3Q91Y16 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pcdha3Q91Y16 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
Pcdha3Q91Y16 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.14■■□□□ 1.94
Pcdha3Q91Y16 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.13■■□□□ 1.93
Pcdha3Q91Y16 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Pcdha3Q91Y16 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Pcdha3Q91Y16 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Pcdha3Q91Y16 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Pcdha3Q91Y16 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Pcdha3Q91Y16 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.07■■□□□ 1.92
Pcdha3Q91Y16 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
Pcdha3Q91Y16 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Pcdha3Q91Y16 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Pcdha3Q91Y16 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Pcdha3Q91Y16 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdha3Q91Y16 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdha3Q91Y16 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Pcdha3Q91Y16 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdha3Q91Y16 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdha3Q91Y16 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdha3Q91Y16 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.97■■□□□ 1.91
Pcdha3Q91Y16 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Pcdha3Q91Y16 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Pcdha3Q91Y16 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.91
Pcdha3Q91Y16 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Pcdha3Q91Y16 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdha3Q91Y16 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.94■■□□□ 1.9
Pcdha3Q91Y16 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdha3Q91Y16 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdha3Q91Y16 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.93■■□□□ 1.9
Pcdha3Q91Y16 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Pcdha3Q91Y16 Peli2-204ENSMUST00000226513 1320 ntBASIC26.9■■□□□ 1.9
Pcdha3Q91Y16 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Pcdha3Q91Y16 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Pcdha3Q91Y16 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.89■■□□□ 1.9
Pcdha3Q91Y16 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Pcdha3Q91Y16 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.88■■□□□ 1.89
Pcdha3Q91Y16 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Pcdha3Q91Y16 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdha3Q91Y16 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
Pcdha3Q91Y16 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Pcdha3Q91Y16 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
Pcdha3Q91Y16 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Pcdha3Q91Y16 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
Pcdha3Q91Y16 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdha3Q91Y16 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdha3Q91Y16 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdha3Q91Y16 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pcdha3Q91Y16 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pcdha3Q91Y16 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
Pcdha3Q91Y16 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdha3Q91Y16 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.78■■□□□ 1.88
Pcdha3Q91Y16 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdha3Q91Y16 Gm16148-201ENSMUST00000119653 893 ntBASIC26.77■■□□□ 1.88
Pcdha3Q91Y16 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
Pcdha3Q91Y16 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdha3Q91Y16 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
Pcdha3Q91Y16 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdha3Q91Y16 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdha3Q91Y16 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.71■■□□□ 1.87
Pcdha3Q91Y16 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdha3Q91Y16 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Pcdha3Q91Y16 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdha3Q91Y16 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdha3Q91Y16 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdha3Q91Y16 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.67■■□□□ 1.86
Pcdha3Q91Y16 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdha3Q91Y16 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Pcdha3Q91Y16 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcdha3Q91Y16 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdha3Q91Y16 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdha3Q91Y16 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdha3Q91Y16 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdha3Q91Y16 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdha3Q91Y16 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdha3Q91Y16 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdha3Q91Y16 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdha3Q91Y16 Zfp131-205ENSMUST00000223812 663 ntBASIC26.57■■□□□ 1.84
Pcdha3Q91Y16 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdha3Q91Y16 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdha3Q91Y16 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 127.1 ms