Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ddx1Q91VR5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Ddx1Q91VR5 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.3■■□□□ 1.96
Ddx1Q91VR5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.29■■□□□ 1.96
Ddx1Q91VR5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Ddx1Q91VR5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Ddx1Q91VR5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Ddx1Q91VR5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ddx1Q91VR5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Ddx1Q91VR5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ddx1Q91VR5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.23■■□□□ 1.95
Ddx1Q91VR5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ddx1Q91VR5 Mipep-204ENSMUST00000225043 1548 ntBASIC27.21■■□□□ 1.95
Ddx1Q91VR5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx1Q91VR5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx1Q91VR5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ddx1Q91VR5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Ddx1Q91VR5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.15■■□□□ 1.94
Ddx1Q91VR5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.15■■□□□ 1.94
Ddx1Q91VR5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
Ddx1Q91VR5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.12■■□□□ 1.93
Ddx1Q91VR5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ddx1Q91VR5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx1Q91VR5 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.08■■□□□ 1.93
Ddx1Q91VR5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ddx1Q91VR5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.07■■□□□ 1.92
Ddx1Q91VR5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ddx1Q91VR5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ddx1Q91VR5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
Ddx1Q91VR5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ddx1Q91VR5 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.99■■□□□ 1.91
Ddx1Q91VR5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Ddx1Q91VR5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Ddx1Q91VR5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ddx1Q91VR5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Ddx1Q91VR5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.94■■□□□ 1.9
Ddx1Q91VR5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ddx1Q91VR5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ddx1Q91VR5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ddx1Q91VR5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ddx1Q91VR5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ddx1Q91VR5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ddx1Q91VR5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ddx1Q91VR5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
Ddx1Q91VR5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ddx1Q91VR5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx1Q91VR5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx1Q91VR5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.8■■□□□ 1.88
Ddx1Q91VR5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Ddx1Q91VR5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx1Q91VR5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx1Q91VR5 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.77■■□□□ 1.88
Ddx1Q91VR5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
Ddx1Q91VR5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx1Q91VR5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
Ddx1Q91VR5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx1Q91VR5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
Ddx1Q91VR5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ddx1Q91VR5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ddx1Q91VR5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.71■■□□□ 1.87
Ddx1Q91VR5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx1Q91VR5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx1Q91VR5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx1Q91VR5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx1Q91VR5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx1Q91VR5 Gm16148-201ENSMUST00000119653 893 ntBASIC26.66■■□□□ 1.86
Ddx1Q91VR5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx1Q91VR5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ddx1Q91VR5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ddx1Q91VR5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Ddx1Q91VR5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ddx1Q91VR5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.6■■□□□ 1.85
Ddx1Q91VR5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.6■■□□□ 1.85
Ddx1Q91VR5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.6■■□□□ 1.85
Ddx1Q91VR5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.59■■□□□ 1.85
Ddx1Q91VR5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx1Q91VR5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx1Q91VR5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx1Q91VR5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx1Q91VR5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx1Q91VR5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx1Q91VR5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
Ddx1Q91VR5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.54■■□□□ 1.84
Ddx1Q91VR5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ddx1Q91VR5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ddx1Q91VR5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ddx1Q91VR5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Ddx1Q91VR5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx1Q91VR5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.48■■□□□ 1.83
Ddx1Q91VR5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx1Q91VR5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
Ddx1Q91VR5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ddx1Q91VR5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ddx1Q91VR5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ddx1Q91VR5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ddx1Q91VR5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.43■■□□□ 1.82
Ddx1Q91VR5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ddx1Q91VR5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ddx1Q91VR5 Peli2-204ENSMUST00000226513 1320 ntBASIC26.41■■□□□ 1.82
Ddx1Q91VR5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 171 ms