Protein–RNA interactions for Protein: Q8R0W6

Ndfip1, NEDD4 family-interacting protein 1, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndfip1Q8R0W6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ndfip1Q8R0W6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndfip1Q8R0W6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndfip1Q8R0W6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndfip1Q8R0W6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndfip1Q8R0W6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndfip1Q8R0W6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ndfip1Q8R0W6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ndfip1Q8R0W6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ndfip1Q8R0W6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ndfip1Q8R0W6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ndfip1Q8R0W6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ndfip1Q8R0W6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.08■□□□□ 0.81
Ndfip1Q8R0W6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ndfip1Q8R0W6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ndfip1Q8R0W6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ndfip1Q8R0W6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ndfip1Q8R0W6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ndfip1Q8R0W6 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.03■□□□□ 0.8
Ndfip1Q8R0W6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ndfip1Q8R0W6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ndfip1Q8R0W6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ndfip1Q8R0W6 Mipep-204ENSMUST00000225043 1548 ntBASIC20.01■□□□□ 0.79
Ndfip1Q8R0W6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ndfip1Q8R0W6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ndfip1Q8R0W6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ndfip1Q8R0W6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ndfip1Q8R0W6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ndfip1Q8R0W6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ndfip1Q8R0W6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ndfip1Q8R0W6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.94■□□□□ 0.78
Ndfip1Q8R0W6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ndfip1Q8R0W6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ndfip1Q8R0W6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ndfip1Q8R0W6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.91■□□□□ 0.78
Ndfip1Q8R0W6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ndfip1Q8R0W6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ndfip1Q8R0W6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ndfip1Q8R0W6 Gm25262-201ENSMUST00000174934 133 ntBASIC19.87■□□□□ 0.77
Ndfip1Q8R0W6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ndfip1Q8R0W6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ndfip1Q8R0W6 Zxda-201ENSMUST00000117281 2621 ntBASIC19.84■□□□□ 0.77
Ndfip1Q8R0W6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ndfip1Q8R0W6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ndfip1Q8R0W6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ndfip1Q8R0W6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ndfip1Q8R0W6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.81■□□□□ 0.76
Ndfip1Q8R0W6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ndfip1Q8R0W6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ndfip1Q8R0W6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ndfip1Q8R0W6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ndfip1Q8R0W6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ndfip1Q8R0W6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ndfip1Q8R0W6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ndfip1Q8R0W6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ndfip1Q8R0W6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ndfip1Q8R0W6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ndfip1Q8R0W6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ndfip1Q8R0W6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ndfip1Q8R0W6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ndfip1Q8R0W6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ndfip1Q8R0W6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ndfip1Q8R0W6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.72■□□□□ 0.75
Ndfip1Q8R0W6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ndfip1Q8R0W6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ndfip1Q8R0W6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ndfip1Q8R0W6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ndfip1Q8R0W6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Ndfip1Q8R0W6 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.71■□□□□ 0.75
Ndfip1Q8R0W6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ndfip1Q8R0W6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ndfip1Q8R0W6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ndfip1Q8R0W6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ndfip1Q8R0W6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ndfip1Q8R0W6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ndfip1Q8R0W6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ndfip1Q8R0W6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ndfip1Q8R0W6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ndfip1Q8R0W6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.67■□□□□ 0.74
Ndfip1Q8R0W6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ndfip1Q8R0W6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ndfip1Q8R0W6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ndfip1Q8R0W6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ndfip1Q8R0W6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ndfip1Q8R0W6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ndfip1Q8R0W6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ndfip1Q8R0W6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ndfip1Q8R0W6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ndfip1Q8R0W6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.62■□□□□ 0.73
Ndfip1Q8R0W6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ndfip1Q8R0W6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ndfip1Q8R0W6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ndfip1Q8R0W6 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.6■□□□□ 0.73
Ndfip1Q8R0W6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ndfip1Q8R0W6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ndfip1Q8R0W6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ndfip1Q8R0W6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.57■□□□□ 0.72
Ndfip1Q8R0W6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.57■□□□□ 0.72
Ndfip1Q8R0W6 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.57■□□□□ 0.72
Ndfip1Q8R0W6 Gm27322-201ENSMUST00000184007 104 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms