Protein–RNA interactions for Protein: Q8C940

A730049H05Rik, RIKEN cDNA A730049H05 gene, mousemouse

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A730049H05RikQ8C940 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
A730049H05RikQ8C940 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
A730049H05RikQ8C940 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
A730049H05RikQ8C940 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.62■■□□□ 1.37
A730049H05RikQ8C940 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
A730049H05RikQ8C940 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
A730049H05RikQ8C940 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
A730049H05RikQ8C940 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
A730049H05RikQ8C940 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.58■■□□□ 1.37
A730049H05RikQ8C940 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
A730049H05RikQ8C940 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
A730049H05RikQ8C940 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
A730049H05RikQ8C940 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
A730049H05RikQ8C940 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
A730049H05RikQ8C940 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
A730049H05RikQ8C940 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
A730049H05RikQ8C940 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
A730049H05RikQ8C940 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
A730049H05RikQ8C940 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
A730049H05RikQ8C940 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
A730049H05RikQ8C940 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
A730049H05RikQ8C940 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.47■■□□□ 1.35
A730049H05RikQ8C940 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
A730049H05RikQ8C940 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
A730049H05RikQ8C940 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.42■■□□□ 1.34
A730049H05RikQ8C940 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
A730049H05RikQ8C940 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
A730049H05RikQ8C940 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.36■■□□□ 1.33
A730049H05RikQ8C940 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.36■■□□□ 1.33
A730049H05RikQ8C940 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
A730049H05RikQ8C940 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.35■■□□□ 1.33
A730049H05RikQ8C940 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
A730049H05RikQ8C940 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
A730049H05RikQ8C940 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
A730049H05RikQ8C940 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
A730049H05RikQ8C940 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
A730049H05RikQ8C940 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.33■■□□□ 1.33
A730049H05RikQ8C940 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
A730049H05RikQ8C940 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
A730049H05RikQ8C940 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
A730049H05RikQ8C940 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
A730049H05RikQ8C940 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
A730049H05RikQ8C940 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
A730049H05RikQ8C940 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
A730049H05RikQ8C940 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
A730049H05RikQ8C940 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
A730049H05RikQ8C940 Gm27322-201ENSMUST00000184007 104 ntBASIC23.28■■□□□ 1.32
A730049H05RikQ8C940 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
A730049H05RikQ8C940 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.27■■□□□ 1.32
A730049H05RikQ8C940 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
A730049H05RikQ8C940 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.26■■□□□ 1.31
A730049H05RikQ8C940 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
A730049H05RikQ8C940 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
A730049H05RikQ8C940 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
A730049H05RikQ8C940 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
A730049H05RikQ8C940 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
A730049H05RikQ8C940 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
A730049H05RikQ8C940 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
A730049H05RikQ8C940 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
A730049H05RikQ8C940 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.2■■□□□ 1.3
A730049H05RikQ8C940 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
A730049H05RikQ8C940 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
A730049H05RikQ8C940 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.18■■□□□ 1.3
A730049H05RikQ8C940 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
A730049H05RikQ8C940 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
A730049H05RikQ8C940 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
A730049H05RikQ8C940 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.17■■□□□ 1.3
A730049H05RikQ8C940 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
A730049H05RikQ8C940 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
A730049H05RikQ8C940 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
A730049H05RikQ8C940 Zxda-201ENSMUST00000117281 2621 ntBASIC23.15■■□□□ 1.3
A730049H05RikQ8C940 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.15■■□□□ 1.3
A730049H05RikQ8C940 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
A730049H05RikQ8C940 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
A730049H05RikQ8C940 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
A730049H05RikQ8C940 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.14■■□□□ 1.29
A730049H05RikQ8C940 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
A730049H05RikQ8C940 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
A730049H05RikQ8C940 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
A730049H05RikQ8C940 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
A730049H05RikQ8C940 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
A730049H05RikQ8C940 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
A730049H05RikQ8C940 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
A730049H05RikQ8C940 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
A730049H05RikQ8C940 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
A730049H05RikQ8C940 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.01■■□□□ 1.27
A730049H05RikQ8C940 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
A730049H05RikQ8C940 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23■■□□□ 1.27
A730049H05RikQ8C940 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
A730049H05RikQ8C940 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23■■□□□ 1.27
A730049H05RikQ8C940 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
A730049H05RikQ8C940 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
A730049H05RikQ8C940 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
A730049H05RikQ8C940 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
A730049H05RikQ8C940 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
A730049H05RikQ8C940 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
A730049H05RikQ8C940 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.96■■□□□ 1.27
A730049H05RikQ8C940 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
A730049H05RikQ8C940 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
A730049H05RikQ8C940 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms