Protein–RNA interactions for Protein: Q8BYR1

Lcmt2, tRNA wybutosine-synthesizing protein 4, mousemouse

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt2Q8BYR1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Lcmt2Q8BYR1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Lcmt2Q8BYR1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Lcmt2Q8BYR1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Lcmt2Q8BYR1 Gm26115-201ENSMUST00000175605 87 ntBASIC24.23■■□□□ 1.47
Lcmt2Q8BYR1 Mipep-204ENSMUST00000225043 1548 ntBASIC24.22■■□□□ 1.47
Lcmt2Q8BYR1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Lcmt2Q8BYR1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Lcmt2Q8BYR1 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.21■■□□□ 1.47
Lcmt2Q8BYR1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Lcmt2Q8BYR1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Lcmt2Q8BYR1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Lcmt2Q8BYR1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Lcmt2Q8BYR1 Gm8109-201ENSMUST00000194076 746 ntBASIC24.16■■□□□ 1.46
Lcmt2Q8BYR1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Lcmt2Q8BYR1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Lcmt2Q8BYR1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Lcmt2Q8BYR1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Lcmt2Q8BYR1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
Lcmt2Q8BYR1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Lcmt2Q8BYR1 Gm27322-201ENSMUST00000184007 104 ntBASIC24.12■■□□□ 1.45
Lcmt2Q8BYR1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Lcmt2Q8BYR1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Lcmt2Q8BYR1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.11■■□□□ 1.45
Lcmt2Q8BYR1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.1■■□□□ 1.45
Lcmt2Q8BYR1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Lcmt2Q8BYR1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Lcmt2Q8BYR1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.07■■□□□ 1.44
Lcmt2Q8BYR1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Lcmt2Q8BYR1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Lcmt2Q8BYR1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Lcmt2Q8BYR1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.05■■□□□ 1.44
Lcmt2Q8BYR1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Lcmt2Q8BYR1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Lcmt2Q8BYR1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Lcmt2Q8BYR1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Lcmt2Q8BYR1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
Lcmt2Q8BYR1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Lcmt2Q8BYR1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Lcmt2Q8BYR1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Lcmt2Q8BYR1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Lcmt2Q8BYR1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Lcmt2Q8BYR1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Lcmt2Q8BYR1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.91■■□□□ 1.42
Lcmt2Q8BYR1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.88■■□□□ 1.41
Lcmt2Q8BYR1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Lcmt2Q8BYR1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Lcmt2Q8BYR1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Lcmt2Q8BYR1 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.85■■□□□ 1.41
Lcmt2Q8BYR1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Lcmt2Q8BYR1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Lcmt2Q8BYR1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Lcmt2Q8BYR1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Lcmt2Q8BYR1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Lcmt2Q8BYR1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Lcmt2Q8BYR1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Lcmt2Q8BYR1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
Lcmt2Q8BYR1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Lcmt2Q8BYR1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Lcmt2Q8BYR1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Lcmt2Q8BYR1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Lcmt2Q8BYR1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Lcmt2Q8BYR1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Lcmt2Q8BYR1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lcmt2Q8BYR1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lcmt2Q8BYR1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Lcmt2Q8BYR1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Lcmt2Q8BYR1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Lcmt2Q8BYR1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Lcmt2Q8BYR1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.72■■□□□ 1.39
Lcmt2Q8BYR1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Lcmt2Q8BYR1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.71■■□□□ 1.39
Lcmt2Q8BYR1 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.69■■□□□ 1.38
Lcmt2Q8BYR1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Lcmt2Q8BYR1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Lcmt2Q8BYR1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Lcmt2Q8BYR1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Lcmt2Q8BYR1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Lcmt2Q8BYR1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Lcmt2Q8BYR1 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.68■■□□□ 1.38
Lcmt2Q8BYR1 Zxda-201ENSMUST00000117281 2621 ntBASIC23.67■■□□□ 1.38
Lcmt2Q8BYR1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Lcmt2Q8BYR1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Lcmt2Q8BYR1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
Lcmt2Q8BYR1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Lcmt2Q8BYR1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Lcmt2Q8BYR1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Lcmt2Q8BYR1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Lcmt2Q8BYR1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Lcmt2Q8BYR1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Lcmt2Q8BYR1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Lcmt2Q8BYR1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Lcmt2Q8BYR1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Lcmt2Q8BYR1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Lcmt2Q8BYR1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.55■■□□□ 1.36
Lcmt2Q8BYR1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Lcmt2Q8BYR1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Lcmt2Q8BYR1 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.53■■□□□ 1.36
Lcmt2Q8BYR1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Lcmt2Q8BYR1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms