Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Cpne3Q8BT60 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Cpne3Q8BT60 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.91■■□□□ 1.58
Cpne3Q8BT60 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.9■■□□□ 1.58
Cpne3Q8BT60 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.89■■□□□ 1.58
Cpne3Q8BT60 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Cpne3Q8BT60 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Cpne3Q8BT60 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.87■■□□□ 1.57
Cpne3Q8BT60 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Cpne3Q8BT60 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Cpne3Q8BT60 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.83■■□□□ 1.57
Cpne3Q8BT60 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.83■■□□□ 1.57
Cpne3Q8BT60 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
Cpne3Q8BT60 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Cpne3Q8BT60 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.81■■□□□ 1.56
Cpne3Q8BT60 Gm27322-201ENSMUST00000184007 104 ntBASIC24.81■■□□□ 1.56
Cpne3Q8BT60 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Cpne3Q8BT60 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Cpne3Q8BT60 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Cpne3Q8BT60 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Cpne3Q8BT60 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.75■■□□□ 1.55
Cpne3Q8BT60 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cpne3Q8BT60 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Cpne3Q8BT60 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cpne3Q8BT60 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.73■■□□□ 1.55
Cpne3Q8BT60 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Cpne3Q8BT60 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Cpne3Q8BT60 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.71■■□□□ 1.55
Cpne3Q8BT60 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Cpne3Q8BT60 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Cpne3Q8BT60 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Cpne3Q8BT60 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
Cpne3Q8BT60 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cpne3Q8BT60 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cpne3Q8BT60 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cpne3Q8BT60 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cpne3Q8BT60 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
Cpne3Q8BT60 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.63■■□□□ 1.53
Cpne3Q8BT60 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cpne3Q8BT60 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
Cpne3Q8BT60 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cpne3Q8BT60 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.62■■□□□ 1.53
Cpne3Q8BT60 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cpne3Q8BT60 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Cpne3Q8BT60 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Cpne3Q8BT60 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
Cpne3Q8BT60 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cpne3Q8BT60 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cpne3Q8BT60 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cpne3Q8BT60 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cpne3Q8BT60 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cpne3Q8BT60 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Cpne3Q8BT60 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cpne3Q8BT60 Gm26115-201ENSMUST00000175605 87 ntBASIC24.52■■□□□ 1.52
Cpne3Q8BT60 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Cpne3Q8BT60 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cpne3Q8BT60 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cpne3Q8BT60 Gm8109-201ENSMUST00000194076 746 ntBASIC24.49■■□□□ 1.51
Cpne3Q8BT60 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cpne3Q8BT60 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cpne3Q8BT60 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cpne3Q8BT60 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cpne3Q8BT60 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cpne3Q8BT60 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cpne3Q8BT60 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cpne3Q8BT60 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cpne3Q8BT60 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cpne3Q8BT60 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cpne3Q8BT60 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Cpne3Q8BT60 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Cpne3Q8BT60 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cpne3Q8BT60 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cpne3Q8BT60 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Cpne3Q8BT60 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cpne3Q8BT60 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cpne3Q8BT60 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Cpne3Q8BT60 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cpne3Q8BT60 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Cpne3Q8BT60 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cpne3Q8BT60 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cpne3Q8BT60 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cpne3Q8BT60 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cpne3Q8BT60 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.35■■□□□ 1.49
Cpne3Q8BT60 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cpne3Q8BT60 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Cpne3Q8BT60 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cpne3Q8BT60 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cpne3Q8BT60 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Cpne3Q8BT60 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cpne3Q8BT60 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Cpne3Q8BT60 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Cpne3Q8BT60 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cpne3Q8BT60 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Cpne3Q8BT60 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Cpne3Q8BT60 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.22■■□□□ 1.47
Cpne3Q8BT60 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Cpne3Q8BT60 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cpne3Q8BT60 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cpne3Q8BT60 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.2■■□□□ 1.46
Cpne3Q8BT60 Zxda-201ENSMUST00000117281 2621 ntBASIC24.19■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms