Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Rnf38Q8BI21 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Rnf38Q8BI21 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Rnf38Q8BI21 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.22■■□□□ 1.63
Rnf38Q8BI21 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Rnf38Q8BI21 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
Rnf38Q8BI21 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rnf38Q8BI21 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Rnf38Q8BI21 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rnf38Q8BI21 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.16■■□□□ 1.62
Rnf38Q8BI21 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rnf38Q8BI21 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rnf38Q8BI21 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.14■■□□□ 1.62
Rnf38Q8BI21 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
Rnf38Q8BI21 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Rnf38Q8BI21 Mipep-204ENSMUST00000225043 1548 ntBASIC25.12■■□□□ 1.61
Rnf38Q8BI21 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rnf38Q8BI21 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rnf38Q8BI21 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rnf38Q8BI21 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Rnf38Q8BI21 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.06■■□□□ 1.6
Rnf38Q8BI21 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rnf38Q8BI21 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Rnf38Q8BI21 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rnf38Q8BI21 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rnf38Q8BI21 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rnf38Q8BI21 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rnf38Q8BI21 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rnf38Q8BI21 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Rnf38Q8BI21 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rnf38Q8BI21 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.99■■□□□ 1.59
Rnf38Q8BI21 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.97■■□□□ 1.59
Rnf38Q8BI21 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rnf38Q8BI21 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Rnf38Q8BI21 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rnf38Q8BI21 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Rnf38Q8BI21 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Rnf38Q8BI21 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Rnf38Q8BI21 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Rnf38Q8BI21 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rnf38Q8BI21 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.86■■□□□ 1.57
Rnf38Q8BI21 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rnf38Q8BI21 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.85■■□□□ 1.57
Rnf38Q8BI21 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.85■■□□□ 1.57
Rnf38Q8BI21 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rnf38Q8BI21 Zxda-201ENSMUST00000117281 2621 ntBASIC24.82■■□□□ 1.56
Rnf38Q8BI21 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rnf38Q8BI21 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rnf38Q8BI21 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Rnf38Q8BI21 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Rnf38Q8BI21 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rnf38Q8BI21 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.8■■□□□ 1.56
Rnf38Q8BI21 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rnf38Q8BI21 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rnf38Q8BI21 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Rnf38Q8BI21 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.79■■□□□ 1.56
Rnf38Q8BI21 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Rnf38Q8BI21 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rnf38Q8BI21 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rnf38Q8BI21 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rnf38Q8BI21 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rnf38Q8BI21 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
Rnf38Q8BI21 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
Rnf38Q8BI21 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.7■■□□□ 1.54
Rnf38Q8BI21 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rnf38Q8BI21 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.69■■□□□ 1.54
Rnf38Q8BI21 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.68■■□□□ 1.54
Rnf38Q8BI21 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Rnf38Q8BI21 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Rnf38Q8BI21 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rnf38Q8BI21 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rnf38Q8BI21 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Rnf38Q8BI21 Gm26115-201ENSMUST00000175605 87 ntBASIC24.64■■□□□ 1.54
Rnf38Q8BI21 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Rnf38Q8BI21 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.62■■□□□ 1.53
Rnf38Q8BI21 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.61■■□□□ 1.53
Rnf38Q8BI21 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rnf38Q8BI21 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnf38Q8BI21 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnf38Q8BI21 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Rnf38Q8BI21 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Rnf38Q8BI21 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Rnf38Q8BI21 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rnf38Q8BI21 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rnf38Q8BI21 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rnf38Q8BI21 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Rnf38Q8BI21 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rnf38Q8BI21 Gm8109-201ENSMUST00000194076 746 ntBASIC24.55■■□□□ 1.52
Rnf38Q8BI21 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rnf38Q8BI21 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rnf38Q8BI21 Gm27322-201ENSMUST00000184007 104 ntBASIC24.53■■□□□ 1.52
Rnf38Q8BI21 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
Rnf38Q8BI21 Amer2-203ENSMUST00000225247 2662 ntBASIC24.52■■□□□ 1.52
Rnf38Q8BI21 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Rnf38Q8BI21 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rnf38Q8BI21 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.52■■□□□ 1.52
Rnf38Q8BI21 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rnf38Q8BI21 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.51■■□□□ 1.51
Rnf38Q8BI21 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rnf38Q8BI21 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms