Protein–RNA interactions for Protein: Q80TM6

R3hdm2, R3H domain-containing protein 2, mousemouse

Known RBP Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm2Q80TM6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
R3hdm2Q80TM6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.23■■■□□ 2.11
R3hdm2Q80TM6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
R3hdm2Q80TM6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
R3hdm2Q80TM6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
R3hdm2Q80TM6 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.21■■■□□ 2.11
R3hdm2Q80TM6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
R3hdm2Q80TM6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
R3hdm2Q80TM6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.19■■■□□ 2.1
R3hdm2Q80TM6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
R3hdm2Q80TM6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
R3hdm2Q80TM6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
R3hdm2Q80TM6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
R3hdm2Q80TM6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
R3hdm2Q80TM6 Zfp131-205ENSMUST00000223812 663 ntBASIC28.09■■■□□ 2.09
R3hdm2Q80TM6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
R3hdm2Q80TM6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
R3hdm2Q80TM6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
R3hdm2Q80TM6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
R3hdm2Q80TM6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
R3hdm2Q80TM6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.01■■■□□ 2.07
R3hdm2Q80TM6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
R3hdm2Q80TM6 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.98■■■□□ 2.07
R3hdm2Q80TM6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
R3hdm2Q80TM6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.96■■■□□ 2.07
R3hdm2Q80TM6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
R3hdm2Q80TM6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
R3hdm2Q80TM6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.94■■■□□ 2.06
R3hdm2Q80TM6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.9■■■□□ 2.06
R3hdm2Q80TM6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
R3hdm2Q80TM6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
R3hdm2Q80TM6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.87■■■□□ 2.05
R3hdm2Q80TM6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
R3hdm2Q80TM6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.84■■■□□ 2.05
R3hdm2Q80TM6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
R3hdm2Q80TM6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
R3hdm2Q80TM6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
R3hdm2Q80TM6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
R3hdm2Q80TM6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
R3hdm2Q80TM6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
R3hdm2Q80TM6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
R3hdm2Q80TM6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
R3hdm2Q80TM6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.8■■■□□ 2.04
R3hdm2Q80TM6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
R3hdm2Q80TM6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
R3hdm2Q80TM6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
R3hdm2Q80TM6 Gm16148-201ENSMUST00000119653 893 ntBASIC27.75■■■□□ 2.03
R3hdm2Q80TM6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
R3hdm2Q80TM6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
R3hdm2Q80TM6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
R3hdm2Q80TM6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
R3hdm2Q80TM6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.65■■■□□ 2.02
R3hdm2Q80TM6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
R3hdm2Q80TM6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
R3hdm2Q80TM6 Peli2-204ENSMUST00000226513 1320 ntBASIC27.65■■■□□ 2.02
R3hdm2Q80TM6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
R3hdm2Q80TM6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
R3hdm2Q80TM6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
R3hdm2Q80TM6 Mipep-204ENSMUST00000225043 1548 ntBASIC27.63■■■□□ 2.01
R3hdm2Q80TM6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
R3hdm2Q80TM6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
R3hdm2Q80TM6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
R3hdm2Q80TM6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
R3hdm2Q80TM6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
R3hdm2Q80TM6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
R3hdm2Q80TM6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.6■■■□□ 2.01
R3hdm2Q80TM6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
R3hdm2Q80TM6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2
R3hdm2Q80TM6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
R3hdm2Q80TM6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
R3hdm2Q80TM6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
R3hdm2Q80TM6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.54■■■□□ 2
R3hdm2Q80TM6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
R3hdm2Q80TM6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.52■■■□□ 2
R3hdm2Q80TM6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.52■■■□□ 2
R3hdm2Q80TM6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
R3hdm2Q80TM6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
R3hdm2Q80TM6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.51■■□□□ 1.99
R3hdm2Q80TM6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
R3hdm2Q80TM6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
R3hdm2Q80TM6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.48■■□□□ 1.99
R3hdm2Q80TM6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
R3hdm2Q80TM6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
R3hdm2Q80TM6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
R3hdm2Q80TM6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
R3hdm2Q80TM6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
R3hdm2Q80TM6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
R3hdm2Q80TM6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
R3hdm2Q80TM6 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.43■■□□□ 1.98
R3hdm2Q80TM6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
R3hdm2Q80TM6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
R3hdm2Q80TM6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
R3hdm2Q80TM6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
R3hdm2Q80TM6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.38■■□□□ 1.97
R3hdm2Q80TM6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
R3hdm2Q80TM6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
R3hdm2Q80TM6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.35■■□□□ 1.97
R3hdm2Q80TM6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
R3hdm2Q80TM6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
R3hdm2Q80TM6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms