Protein–RNA interactions for Protein: Q6NZF1

Zc3h11a, Zinc finger CCCH domain-containing protein 11A, mousemouse

Known RBP Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h11aQ6NZF1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Zc3h11aQ6NZF1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.48■■□□□ 1.67
Zc3h11aQ6NZF1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Zc3h11aQ6NZF1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Zc3h11aQ6NZF1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Zc3h11aQ6NZF1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Zc3h11aQ6NZF1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Zc3h11aQ6NZF1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Zc3h11aQ6NZF1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Zc3h11aQ6NZF1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Zc3h11aQ6NZF1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
Zc3h11aQ6NZF1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.38■■□□□ 1.65
Zc3h11aQ6NZF1 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.36■■□□□ 1.65
Zc3h11aQ6NZF1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Zc3h11aQ6NZF1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Zc3h11aQ6NZF1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Zc3h11aQ6NZF1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Zc3h11aQ6NZF1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Zc3h11aQ6NZF1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Zc3h11aQ6NZF1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Zc3h11aQ6NZF1 Gm24804-201ENSMUST00000174982 85 ntBASIC25.27■■□□□ 1.64
Zc3h11aQ6NZF1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Zc3h11aQ6NZF1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.24■■□□□ 1.63
Zc3h11aQ6NZF1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Zc3h11aQ6NZF1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Zc3h11aQ6NZF1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Zc3h11aQ6NZF1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Zc3h11aQ6NZF1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
Zc3h11aQ6NZF1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Zc3h11aQ6NZF1 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.19■■□□□ 1.62
Zc3h11aQ6NZF1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Zc3h11aQ6NZF1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Zc3h11aQ6NZF1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Zc3h11aQ6NZF1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Zc3h11aQ6NZF1 Peli2-204ENSMUST00000226513 1320 ntBASIC25.18■■□□□ 1.62
Zc3h11aQ6NZF1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Zc3h11aQ6NZF1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Zc3h11aQ6NZF1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
Zc3h11aQ6NZF1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Zc3h11aQ6NZF1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Zc3h11aQ6NZF1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Zc3h11aQ6NZF1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Zc3h11aQ6NZF1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Zc3h11aQ6NZF1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Zc3h11aQ6NZF1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Zc3h11aQ6NZF1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.06■■□□□ 1.6
Zc3h11aQ6NZF1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Zc3h11aQ6NZF1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Zc3h11aQ6NZF1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Zc3h11aQ6NZF1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Zc3h11aQ6NZF1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.04■■□□□ 1.6
Zc3h11aQ6NZF1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Zc3h11aQ6NZF1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.01■■□□□ 1.59
Zc3h11aQ6NZF1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25■■□□□ 1.59
Zc3h11aQ6NZF1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Zc3h11aQ6NZF1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.98■■□□□ 1.59
Zc3h11aQ6NZF1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Zc3h11aQ6NZF1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Zc3h11aQ6NZF1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Zc3h11aQ6NZF1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.97■■□□□ 1.59
Zc3h11aQ6NZF1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.97■■□□□ 1.59
Zc3h11aQ6NZF1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.59
Zc3h11aQ6NZF1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
Zc3h11aQ6NZF1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Zc3h11aQ6NZF1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Zc3h11aQ6NZF1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Zc3h11aQ6NZF1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Zc3h11aQ6NZF1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Zc3h11aQ6NZF1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
Zc3h11aQ6NZF1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Zc3h11aQ6NZF1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Zc3h11aQ6NZF1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.88■■□□□ 1.57
Zc3h11aQ6NZF1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Zc3h11aQ6NZF1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.87■■□□□ 1.57
Zc3h11aQ6NZF1 Gm16148-201ENSMUST00000119653 893 ntBASIC24.87■■□□□ 1.57
Zc3h11aQ6NZF1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
Zc3h11aQ6NZF1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Zc3h11aQ6NZF1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
Zc3h11aQ6NZF1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.85■■□□□ 1.57
Zc3h11aQ6NZF1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Zc3h11aQ6NZF1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Zc3h11aQ6NZF1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Zc3h11aQ6NZF1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Zc3h11aQ6NZF1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.81■■□□□ 1.56
Zc3h11aQ6NZF1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Zc3h11aQ6NZF1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Zc3h11aQ6NZF1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Zc3h11aQ6NZF1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Zc3h11aQ6NZF1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.78■■□□□ 1.56
Zc3h11aQ6NZF1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Zc3h11aQ6NZF1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Zc3h11aQ6NZF1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.77■■□□□ 1.56
Zc3h11aQ6NZF1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Zc3h11aQ6NZF1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Zc3h11aQ6NZF1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.74■■□□□ 1.55
Zc3h11aQ6NZF1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.74■■□□□ 1.55
Zc3h11aQ6NZF1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Zc3h11aQ6NZF1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Zc3h11aQ6NZF1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Zc3h11aQ6NZF1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms