Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Zfp248Q640N4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Zfp248Q640N4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.69■□□□□ 0.74
Zfp248Q640N4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.67■□□□□ 0.74
Zfp248Q640N4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Zfp248Q640N4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.65■□□□□ 0.74
Zfp248Q640N4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Zfp248Q640N4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Zfp248Q640N4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Zfp248Q640N4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Zfp248Q640N4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.6■□□□□ 0.73
Zfp248Q640N4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Zfp248Q640N4 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.6■□□□□ 0.73
Zfp248Q640N4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Zfp248Q640N4 Gm27322-201ENSMUST00000184007 104 ntBASIC19.58■□□□□ 0.72
Zfp248Q640N4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Zfp248Q640N4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.56■□□□□ 0.72
Zfp248Q640N4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.55■□□□□ 0.72
Zfp248Q640N4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Zfp248Q640N4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Zfp248Q640N4 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.54■□□□□ 0.72
Zfp248Q640N4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Zfp248Q640N4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Zfp248Q640N4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Zfp248Q640N4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.53■□□□□ 0.72
Zfp248Q640N4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
Zfp248Q640N4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Zfp248Q640N4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Zfp248Q640N4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Zfp248Q640N4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zfp248Q640N4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zfp248Q640N4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.49■□□□□ 0.71
Zfp248Q640N4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zfp248Q640N4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zfp248Q640N4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zfp248Q640N4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Zfp248Q640N4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Zfp248Q640N4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.48■□□□□ 0.71
Zfp248Q640N4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Zfp248Q640N4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Zfp248Q640N4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Zfp248Q640N4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Zfp248Q640N4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Zfp248Q640N4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Zfp248Q640N4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zfp248Q640N4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zfp248Q640N4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Zfp248Q640N4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zfp248Q640N4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Zfp248Q640N4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Zfp248Q640N4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Zfp248Q640N4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Zfp248Q640N4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zfp248Q640N4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.35■□□□□ 0.69
Zfp248Q640N4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Zfp248Q640N4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zfp248Q640N4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Zfp248Q640N4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Zfp248Q640N4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zfp248Q640N4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zfp248Q640N4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Zfp248Q640N4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Zfp248Q640N4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zfp248Q640N4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zfp248Q640N4 Gm26115-201ENSMUST00000175605 87 ntBASIC19.3■□□□□ 0.68
Zfp248Q640N4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zfp248Q640N4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zfp248Q640N4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Zfp248Q640N4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Zfp248Q640N4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zfp248Q640N4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zfp248Q640N4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Zfp248Q640N4 Gm8109-201ENSMUST00000194076 746 ntBASIC19.25■□□□□ 0.67
Zfp248Q640N4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zfp248Q640N4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Zfp248Q640N4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zfp248Q640N4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zfp248Q640N4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zfp248Q640N4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zfp248Q640N4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zfp248Q640N4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Zfp248Q640N4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Zfp248Q640N4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Zfp248Q640N4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zfp248Q640N4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Zfp248Q640N4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zfp248Q640N4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
Zfp248Q640N4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.18■□□□□ 0.66
Zfp248Q640N4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Zfp248Q640N4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zfp248Q640N4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zfp248Q640N4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Zfp248Q640N4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp248Q640N4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp248Q640N4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.15■□□□□ 0.66
Zfp248Q640N4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Zfp248Q640N4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zfp248Q640N4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Zfp248Q640N4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Zfp248Q640N4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms