Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ripk1Q60855 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.61■■□□□ 1.53
Ripk1Q60855 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ripk1Q60855 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ripk1Q60855 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.58■■□□□ 1.53
Ripk1Q60855 Gm26115-201ENSMUST00000175605 87 ntBASIC24.55■■□□□ 1.52
Ripk1Q60855 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.54■■□□□ 1.52
Ripk1Q60855 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.54■■□□□ 1.52
Ripk1Q60855 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.52■■□□□ 1.52
Ripk1Q60855 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ripk1Q60855 Gm8109-201ENSMUST00000194076 746 ntBASIC24.48■■□□□ 1.51
Ripk1Q60855 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ripk1Q60855 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.46■■□□□ 1.51
Ripk1Q60855 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Ripk1Q60855 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Ripk1Q60855 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ripk1Q60855 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ripk1Q60855 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ripk1Q60855 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ripk1Q60855 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ripk1Q60855 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ripk1Q60855 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ripk1Q60855 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Ripk1Q60855 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ripk1Q60855 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ripk1Q60855 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ripk1Q60855 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ripk1Q60855 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ripk1Q60855 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ripk1Q60855 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ripk1Q60855 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ripk1Q60855 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
Ripk1Q60855 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Ripk1Q60855 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ripk1Q60855 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ripk1Q60855 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ripk1Q60855 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
Ripk1Q60855 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Ripk1Q60855 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Ripk1Q60855 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Ripk1Q60855 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ripk1Q60855 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ripk1Q60855 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.11■■□□□ 1.45
Ripk1Q60855 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Ripk1Q60855 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ripk1Q60855 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Ripk1Q60855 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.08■■□□□ 1.45
Ripk1Q60855 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Ripk1Q60855 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.08■■□□□ 1.44
Ripk1Q60855 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ripk1Q60855 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ripk1Q60855 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ripk1Q60855 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ripk1Q60855 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ripk1Q60855 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ripk1Q60855 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ripk1Q60855 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ripk1Q60855 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ripk1Q60855 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ripk1Q60855 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ripk1Q60855 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ripk1Q60855 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24■■□□□ 1.43
Ripk1Q60855 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ripk1Q60855 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ripk1Q60855 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ripk1Q60855 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.97■■□□□ 1.43
Ripk1Q60855 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Ripk1Q60855 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ripk1Q60855 Peli2-204ENSMUST00000226513 1320 ntBASIC23.96■■□□□ 1.43
Ripk1Q60855 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.96■■□□□ 1.43
Ripk1Q60855 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ripk1Q60855 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ripk1Q60855 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.92■■□□□ 1.42
Ripk1Q60855 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ripk1Q60855 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ripk1Q60855 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ripk1Q60855 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ripk1Q60855 Gm24804-201ENSMUST00000174982 85 ntBASIC23.89■■□□□ 1.41
Ripk1Q60855 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Ripk1Q60855 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ripk1Q60855 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ripk1Q60855 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.87■■□□□ 1.41
Ripk1Q60855 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ripk1Q60855 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ripk1Q60855 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ripk1Q60855 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
Ripk1Q60855 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Ripk1Q60855 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ripk1Q60855 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Ripk1Q60855 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ripk1Q60855 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ripk1Q60855 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.82■■□□□ 1.4
Ripk1Q60855 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ripk1Q60855 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Ripk1Q60855 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ripk1Q60855 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ripk1Q60855 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.78■■□□□ 1.4
Ripk1Q60855 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ripk1Q60855 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ripk1Q60855 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms