Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav7d-3Q5R1I1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.87■□□□□ 0.61
Trav7d-3Q5R1I1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav7d-3Q5R1I1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav7d-3Q5R1I1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav7d-3Q5R1I1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav7d-3Q5R1I1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav7d-3Q5R1I1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.84■□□□□ 0.61
Trav7d-3Q5R1I1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav7d-3Q5R1I1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav7d-3Q5R1I1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trav7d-3Q5R1I1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7d-3Q5R1I1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7d-3Q5R1I1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7d-3Q5R1I1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.82■□□□□ 0.6
Trav7d-3Q5R1I1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trav7d-3Q5R1I1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.78■□□□□ 0.6
Trav7d-3Q5R1I1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav7d-3Q5R1I1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trav7d-3Q5R1I1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav7d-3Q5R1I1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav7d-3Q5R1I1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav7d-3Q5R1I1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trav7d-3Q5R1I1 Gm27322-201ENSMUST00000184007 104 ntBASIC18.71■□□□□ 0.59
Trav7d-3Q5R1I1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav7d-3Q5R1I1 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.7■□□□□ 0.58
Trav7d-3Q5R1I1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.7■□□□□ 0.58
Trav7d-3Q5R1I1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav7d-3Q5R1I1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Trav7d-3Q5R1I1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.68■□□□□ 0.58
Trav7d-3Q5R1I1 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.68■□□□□ 0.58
Trav7d-3Q5R1I1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav7d-3Q5R1I1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav7d-3Q5R1I1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav7d-3Q5R1I1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav7d-3Q5R1I1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav7d-3Q5R1I1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trav7d-3Q5R1I1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
Trav7d-3Q5R1I1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav7d-3Q5R1I1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.64■□□□□ 0.57
Trav7d-3Q5R1I1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trav7d-3Q5R1I1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav7d-3Q5R1I1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Trav7d-3Q5R1I1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.63■□□□□ 0.57
Trav7d-3Q5R1I1 Zxda-201ENSMUST00000117281 2621 ntBASIC18.63■□□□□ 0.57
Trav7d-3Q5R1I1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav7d-3Q5R1I1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Trav7d-3Q5R1I1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.63■□□□□ 0.57
Trav7d-3Q5R1I1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav7d-3Q5R1I1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav7d-3Q5R1I1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Trav7d-3Q5R1I1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav7d-3Q5R1I1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav7d-3Q5R1I1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav7d-3Q5R1I1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav7d-3Q5R1I1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav7d-3Q5R1I1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7d-3Q5R1I1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav7d-3Q5R1I1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav7d-3Q5R1I1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav7d-3Q5R1I1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trav7d-3Q5R1I1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav7d-3Q5R1I1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav7d-3Q5R1I1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav7d-3Q5R1I1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav7d-3Q5R1I1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7d-3Q5R1I1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7d-3Q5R1I1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7d-3Q5R1I1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7d-3Q5R1I1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7d-3Q5R1I1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7d-3Q5R1I1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7d-3Q5R1I1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav7d-3Q5R1I1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav7d-3Q5R1I1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav7d-3Q5R1I1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav7d-3Q5R1I1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav7d-3Q5R1I1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav7d-3Q5R1I1 Gm26115-201ENSMUST00000175605 87 ntBASIC18.42■□□□□ 0.54
Trav7d-3Q5R1I1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav7d-3Q5R1I1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav7d-3Q5R1I1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7d-3Q5R1I1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7d-3Q5R1I1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav7d-3Q5R1I1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav7d-3Q5R1I1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav7d-3Q5R1I1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav7d-3Q5R1I1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav7d-3Q5R1I1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.37■□□□□ 0.53
Trav7d-3Q5R1I1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7d-3Q5R1I1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7d-3Q5R1I1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7d-3Q5R1I1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7d-3Q5R1I1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7d-3Q5R1I1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trav7d-3Q5R1I1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trav7d-3Q5R1I1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7d-3Q5R1I1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7d-3Q5R1I1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7d-3Q5R1I1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms