Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cln6Q3U466 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.85■■□□□ 1.09
Cln6Q3U466 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cln6Q3U466 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.83■■□□□ 1.09
Cln6Q3U466 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cln6Q3U466 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cln6Q3U466 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cln6Q3U466 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
Cln6Q3U466 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cln6Q3U466 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cln6Q3U466 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cln6Q3U466 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cln6Q3U466 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cln6Q3U466 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cln6Q3U466 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cln6Q3U466 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Cln6Q3U466 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cln6Q3U466 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cln6Q3U466 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.74■■□□□ 1.07
Cln6Q3U466 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Cln6Q3U466 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cln6Q3U466 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cln6Q3U466 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cln6Q3U466 Mipep-204ENSMUST00000225043 1548 ntBASIC21.7■■□□□ 1.07
Cln6Q3U466 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cln6Q3U466 Gm25262-201ENSMUST00000174934 133 ntBASIC21.67■■□□□ 1.06
Cln6Q3U466 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cln6Q3U466 Zxda-201ENSMUST00000117281 2621 ntBASIC21.65■■□□□ 1.06
Cln6Q3U466 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cln6Q3U466 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cln6Q3U466 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Cln6Q3U466 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cln6Q3U466 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cln6Q3U466 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cln6Q3U466 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.6■■□□□ 1.05
Cln6Q3U466 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cln6Q3U466 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cln6Q3U466 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cln6Q3U466 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.57■■□□□ 1.04
Cln6Q3U466 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cln6Q3U466 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cln6Q3U466 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cln6Q3U466 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cln6Q3U466 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cln6Q3U466 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cln6Q3U466 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cln6Q3U466 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cln6Q3U466 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cln6Q3U466 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cln6Q3U466 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Cln6Q3U466 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cln6Q3U466 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cln6Q3U466 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cln6Q3U466 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cln6Q3U466 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cln6Q3U466 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.45■■□□□ 1.03
Cln6Q3U466 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cln6Q3U466 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.45■■□□□ 1.02
Cln6Q3U466 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cln6Q3U466 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cln6Q3U466 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cln6Q3U466 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cln6Q3U466 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.41■■□□□ 1.02
Cln6Q3U466 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.41■■□□□ 1.02
Cln6Q3U466 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cln6Q3U466 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cln6Q3U466 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cln6Q3U466 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Cln6Q3U466 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cln6Q3U466 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cln6Q3U466 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cln6Q3U466 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Cln6Q3U466 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cln6Q3U466 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cln6Q3U466 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cln6Q3U466 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cln6Q3U466 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cln6Q3U466 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
Cln6Q3U466 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cln6Q3U466 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Cln6Q3U466 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cln6Q3U466 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cln6Q3U466 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Cln6Q3U466 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cln6Q3U466 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cln6Q3U466 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Cln6Q3U466 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Cln6Q3U466 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.31■■□□□ 1
Cln6Q3U466 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cln6Q3U466 Gm27322-201ENSMUST00000184007 104 ntBASIC21.3■■□□□ 1
Cln6Q3U466 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cln6Q3U466 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cln6Q3U466 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cln6Q3U466 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Cln6Q3U466 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.27■■□□□ 1
Cln6Q3U466 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.27■■□□□ 1
Cln6Q3U466 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cln6Q3U466 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cln6Q3U466 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.26■□□□□ 0.99
Cln6Q3U466 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms