Protein–RNA interactions for Protein: Q02725

VTC3, Vacuolar transporter chaperone 3, yeast

Predictions only

Length 835 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC3	Q02725	GAL1	YBR020W	1587 nt		11.94	□□□□□ -0.5
VTC3	Q02725	TAD3	YLR316C	969 nt		11.93	□□□□□ -0.5
VTC3	Q02725	AQY1	YPR192W	918 nt		11.92	□□□□□ -0.5
VTC3	Q02725	TRM5	YHR070W	1500 nt		11.91	□□□□□ -0.5
VTC3	Q02725	SWE1	YJL187C	2460 nt		11.88	□□□□□ -0.51
VTC3	Q02725	ATF2	YGR177C	1608 nt		11.87	□□□□□ -0.51
VTC3	Q02725	ERF2	YLR246W	1080 nt		11.87	□□□□□ -0.51
VTC3	Q02725	LYS4	YDR234W	2082 nt		11.87	□□□□□ -0.51
VTC3	Q02725	YFL067W	YFL067W	528 nt		11.83	□□□□□ -0.52
VTC3	Q02725	CRR1	YLR213C	1269 nt		11.83	□□□□□ -0.52
VTC3	Q02725	STB1	YNL309W	1263 nt		11.83	□□□□□ -0.52
VTC3	Q02725	DDR2	YOL052C-A	186 nt		11.83	□□□□□ -0.52
VTC3	Q02725	YFR018C	YFR018C	1092 nt		11.82	□□□□□ -0.52
VTC3	Q02725	SPC25	YER018C	666 nt		11.81	□□□□□ -0.52
VTC3	Q02725	YDR524C-B	YDR524C-B	201 nt		11.79	□□□□□ -0.52
VTC3	Q02725	CCT4	YDL143W	1587 nt		11.77	□□□□□ -0.53
VTC3	Q02725	UME6	YDR207C	2511 nt		11.76	□□□□□ -0.53
VTC3	Q02725	YDL086C-A	YDL086C-A	435 nt		11.76	□□□□□ -0.53
VTC3	Q02725	PRE6	YOL038W	765 nt		11.76	□□□□□ -0.53
VTC3	Q02725	HSP60	YLR259C	1719 nt		11.76	□□□□□ -0.53
VTC3	Q02725	GPI16	YHR188C	1833 nt		11.75	□□□□□ -0.53
VTC3	Q02725	YFL015W-A	YFL015W-A	318 nt		11.75	□□□□□ -0.53
VTC3	Q02725	BDH1	YAL060W	1149 nt		11.75	□□□□□ -0.53
VTC3	Q02725	PAU16	YKL224C	372 nt		11.73	□□□□□ -0.53
VTC3	Q02725	SNG1	YGR197C	1644 nt		11.72	□□□□□ -0.53
VTC3	Q02725	HEM12	YDR047W	1089 nt		11.72	□□□□□ -0.53
VTC3	Q02725	VPS60	YDR486C	690 nt		11.72	□□□□□ -0.53
VTC3	Q02725	RRT5	YFR032C	870 nt		11.71	□□□□□ -0.53
VTC3	Q02725	MIC10	YCL057C-A	294 nt		11.71	□□□□□ -0.53
VTC3	Q02725	ANP1	YEL036C	1503 nt		11.7	□□□□□ -0.54
VTC3	Q02725	YLR415C	YLR415C	339 nt		11.7	□□□□□ -0.54
VTC3	Q02725	SWC5	YBR231C	912 nt		11.7	□□□□□ -0.54
VTC3	Q02725	YSP3	YOR003W	1437 nt		11.69	□□□□□ -0.54
VTC3	Q02725	YFL066C	YFL066C	1179 nt		11.69	□□□□□ -0.54
VTC3	Q02725	FEN2	YCR028C	1539 nt		11.69	□□□□□ -0.54
VTC3	Q02725	PEX25	YPL112C	1185 nt		11.68	□□□□□ -0.54
VTC3	Q02725	ALG3	YBL082C	1377 nt		11.67	□□□□□ -0.54
VTC3	Q02725	GLK1	YCL040W	1503 nt		11.66	□□□□□ -0.54
VTC3	Q02725	YNL115C	YNL115C	1935 nt		11.64	□□□□□ -0.55
VTC3	Q02725	YHR056W-A	YHR056W-A	435 nt		11.6	□□□□□ -0.55
VTC3	Q02725	RPM1	RPM1	483 nt		11.6	□□□□□ -0.55
VTC3	Q02725	FUR4	YBR021W	1902 nt		11.58	□□□□□ -0.55
VTC3	Q02725	YIR016W	YIR016W	798 nt		11.58	□□□□□ -0.56
VTC3	Q02725	CCA1	YER168C	1641 nt		11.53	□□□□□ -0.56
VTC3	Q02725	RAX1	YOR301W	1308 nt		11.53	□□□□□ -0.56
VTC3	Q02725	ALG12	YNR030W	1656 nt		11.52	□□□□□ -0.56
VTC3	Q02725	VPS75	YNL246W	795 nt		11.48	□□□□□ -0.57
VTC3	Q02725	BNA2	YJR078W	1362 nt		11.48	□□□□□ -0.57
VTC3	Q02725	MCH5	YOR306C	1566 nt		11.47	□□□□□ -0.57
VTC3	Q02725	PRP4	YPR178W	1398 nt		11.45	□□□□□ -0.58
VTC3	Q02725	MIC12	YBR262C	321 nt		11.44	□□□□□ -0.58
VTC3	Q02725	TIM17	YJL143W	477 nt		11.43	□□□□□ -0.58
VTC3	Q02725	NAT4	YMR069W	858 nt		11.42	□□□□□ -0.58
VTC3	Q02725	SHM2	YLR058C	1410 nt		11.4	□□□□□ -0.58
VTC3	Q02725	XDJ1	YLR090W	1380 nt		11.4	□□□□□ -0.59
VTC3	Q02725	MIR1	YJR077C	936 nt		11.39	□□□□□ -0.59
VTC3	Q02725	DPS1	YLL018C	1674 nt		11.36	□□□□□ -0.59
VTC3	Q02725	AAC1	YMR056C	930 nt		11.36	□□□□□ -0.59
VTC3	Q02725	THI74	YDR438W	1113 nt		11.35	□□□□□ -0.59
VTC3	Q02725	SBA1	YKL117W	651 nt		11.34	□□□□□ -0.59
VTC3	Q02725	HHO1	YPL127C	777 nt		11.34	□□□□□ -0.59
VTC3	Q02725	MSF1	YPR047W	1410 nt		11.34	□□□□□ -0.59
VTC3	Q02725	PAU7	YAR020C	168 nt		11.33	□□□□□ -0.6
VTC3	Q02725	GDH3	YAL062W	1374 nt		11.32	□□□□□ -0.6
VTC3	Q02725	YGR201C	YGR201C	678 nt		11.31	□□□□□ -0.6
VTC3	Q02725	DUS1	YML080W	1272 nt		11.31	□□□□□ -0.6
VTC3	Q02725	BMT6	YLR063W	1098 nt		11.3	□□□□□ -0.6
VTC3	Q02725	NIT1	YIL164C	600 nt		11.29	□□□□□ -0.6
VTC3	Q02725	SGT2	YOR007C	1041 nt		11.28	□□□□□ -0.6
VTC3	Q02725	YKR005C	YKR005C	1578 nt		11.28	□□□□□ -0.6
VTC3	Q02725	NAR1	YNL240C	1476 nt		11.27	□□□□□ -0.6
VTC3	Q02725	DAT1	YML113W	747 nt		11.25	□□□□□ -0.61
VTC3	Q02725	AGP1	YCL025C	1902 nt		11.24	□□□□□ -0.61
VTC3	Q02725	SHB17	YKR043C	816 nt		11.23	□□□□□ -0.61
VTC3	Q02725	AVT6	YER119C	1347 nt		11.23	□□□□□ -0.61
VTC3	Q02725	UBA4	YHR111W	1323 nt		11.21	□□□□□ -0.61
VTC3	Q02725	BIO5	YNR056C	1686 nt		11.2	□□□□□ -0.62
VTC3	Q02725	YCL074W	YCL074W	927 nt		11.19	□□□□□ -0.62
VTC3	Q02725	SNF1	YDR477W	1902 nt		11.19	□□□□□ -0.62
VTC3	Q02725	YDR010C	YDR010C	333 nt		11.18	□□□□□ -0.62
VTC3	Q02725	YGR259C	YGR259C	441 nt		11.17	□□□□□ -0.62
VTC3	Q02725	GOR1	YNL274C	1053 nt		11.17	□□□□□ -0.62
VTC3	Q02725	DUT1	YBR252W	444 nt		11.16	□□□□□ -0.62
VTC3	Q02725	YGL034C	YGL034C	366 nt		11.15	□□□□□ -0.62
VTC3	Q02725	YSR3	YKR053C	1215 nt		11.14	□□□□□ -0.63
VTC3	Q02725	RET2	YFR051C	1641 nt		11.09	□□□□□ -0.63
VTC3	Q02725	XYL2	YLR070C	1071 nt		11.08	□□□□□ -0.64
VTC3	Q02725	YJL225C	YJL225C	5277 nt		11.08	□□□□□ -0.64
VTC3	Q02725	PHO89	YBR296C	1725 nt		11.07	□□□□□ -0.64
VTC3	Q02725	YCR102C	YCR102C	1107 nt		11.07	□□□□□ -0.64
VTC3	Q02725	IRC24	YIR036C	792 nt		11.07	□□□□□ -0.64
VTC3	Q02725	RDN18-1	RDN18-1	1800 nt		11.03	□□□□□ -0.64
VTC3	Q02725	RDN18-2	RDN18-2	1800 nt		11.03	□□□□□ -0.64
VTC3	Q02725	CYT2	YKL087C	675 nt		11.01	□□□□□ -0.65
VTC3	Q02725	PBP1	YGR178C	2169 nt		11.01	□□□□□ -0.65
VTC3	Q02725	STR3	YGL184C	1398 nt		11.01	□□□□□ -0.65
VTC3	Q02725	YCR087W	YCR087W	516 nt		11	□□□□□ -0.65
VTC3	Q02725	RBG1	YAL036C	1110 nt		11	□□□□□ -0.65
VTC3	Q02725	AQY2	YLL052C	450 nt		11	□□□□□ -0.65
VTC3	Q02725	NDI1	YML120C	1542 nt		10.99	□□□□□ -0.65

Retrieved 100 of 7,029 protein–RNA pairs in 32.4 ms