Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ube2d3P61079 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.52■□□□□ 0.56
Ube2d3P61079 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.51■□□□□ 0.55
Ube2d3P61079 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ube2d3P61079 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.49■□□□□ 0.55
Ube2d3P61079 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube2d3P61079 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube2d3P61079 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube2d3P61079 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube2d3P61079 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube2d3P61079 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube2d3P61079 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube2d3P61079 Mipep-204ENSMUST00000225043 1548 ntBASIC18.41■□□□□ 0.54
Ube2d3P61079 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube2d3P61079 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ube2d3P61079 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube2d3P61079 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube2d3P61079 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube2d3P61079 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube2d3P61079 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube2d3P61079 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube2d3P61079 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.34■□□□□ 0.53
Ube2d3P61079 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ube2d3P61079 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Ube2d3P61079 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.32■□□□□ 0.52
Ube2d3P61079 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ube2d3P61079 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube2d3P61079 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.3■□□□□ 0.52
Ube2d3P61079 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ube2d3P61079 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ube2d3P61079 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube2d3P61079 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube2d3P61079 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube2d3P61079 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ube2d3P61079 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ube2d3P61079 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ube2d3P61079 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.25■□□□□ 0.51
Ube2d3P61079 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.24■□□□□ 0.51
Ube2d3P61079 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ube2d3P61079 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ube2d3P61079 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube2d3P61079 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube2d3P61079 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube2d3P61079 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube2d3P61079 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.21■□□□□ 0.51
Ube2d3P61079 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.21■□□□□ 0.51
Ube2d3P61079 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ube2d3P61079 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube2d3P61079 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube2d3P61079 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.17■□□□□ 0.5
Ube2d3P61079 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ube2d3P61079 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube2d3P61079 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube2d3P61079 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube2d3P61079 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.16■□□□□ 0.5
Ube2d3P61079 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube2d3P61079 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube2d3P61079 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube2d3P61079 Gm27322-201ENSMUST00000184007 104 ntBASIC18.14■□□□□ 0.49
Ube2d3P61079 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ube2d3P61079 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube2d3P61079 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube2d3P61079 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.13■□□□□ 0.49
Ube2d3P61079 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.13■□□□□ 0.49
Ube2d3P61079 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Ube2d3P61079 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.12■□□□□ 0.49
Ube2d3P61079 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Ube2d3P61079 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
Ube2d3P61079 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube2d3P61079 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube2d3P61079 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube2d3P61079 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube2d3P61079 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube2d3P61079 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ube2d3P61079 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube2d3P61079 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.07■□□□□ 0.48
Ube2d3P61079 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube2d3P61079 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube2d3P61079 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube2d3P61079 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube2d3P61079 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ube2d3P61079 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube2d3P61079 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube2d3P61079 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
Ube2d3P61079 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ube2d3P61079 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ube2d3P61079 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ube2d3P61079 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ube2d3P61079 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ube2d3P61079 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ube2d3P61079 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Ube2d3P61079 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ube2d3P61079 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ube2d3P61079 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ube2d3P61079 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ube2d3P61079 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ube2d3P61079 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube2d3P61079 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube2d3P61079 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube2d3P61079 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms