Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 CRR1YLR213C 1269 nt12.6□□□□□ -0.39
HDA1P53973 PTK1YKL198C 1989 nt12.58□□□□□ -0.4
HDA1P53973 ERF2YLR246W 1080 nt12.58□□□□□ -0.4
HDA1P53973 MIC10YCL057C-A 294 nt12.57□□□□□ -0.4
HDA1P53973 STB1YNL309W 1263 nt12.56□□□□□ -0.4
HDA1P53973 AQY1YPR192W 918 nt12.56□□□□□ -0.4
HDA1P53973 SPC25YER018C 666 nt12.55□□□□□ -0.4
HDA1P53973 BDH1YAL060W 1149 nt12.54□□□□□ -0.4
HDA1P53973 YDR524C-BYDR524C-B 201 nt12.53□□□□□ -0.4
HDA1P53973 YFL015W-AYFL015W-A 318 nt12.53□□□□□ -0.4
HDA1P53973 SNG1YGR197C 1644 nt12.52□□□□□ -0.4
HDA1P53973 YFL066CYFL066C 1179 nt12.52□□□□□ -0.41
HDA1P53973 YFR018CYFR018C 1092 nt12.52□□□□□ -0.41
HDA1P53973 DDR2YOL052C-A 186 nt12.52□□□□□ -0.41
HDA1P53973 YFL067WYFL067W 528 nt12.5□□□□□ -0.41
HDA1P53973 CCT4YDL143W 1587 nt12.5□□□□□ -0.41
HDA1P53973 ALG3YBL082C 1377 nt12.49□□□□□ -0.41
HDA1P53973 VPS60YDR486C 690 nt12.49□□□□□ -0.41
HDA1P53973 YDL086C-AYDL086C-A 435 nt12.48□□□□□ -0.41
HDA1P53973 PAU16YKL224C 372 nt12.48□□□□□ -0.41
HDA1P53973 ANP1YEL036C 1503 nt12.47□□□□□ -0.41
HDA1P53973 YSP3YOR003W 1437 nt12.47□□□□□ -0.41
HDA1P53973 FEN2YCR028C 1539 nt12.44□□□□□ -0.42
HDA1P53973 HEM12YDR047W 1089 nt12.44□□□□□ -0.42
HDA1P53973 GPI16YHR188C 1833 nt12.41□□□□□ -0.42
HDA1P53973 YNL115CYNL115C 1935 nt12.39□□□□□ -0.43
HDA1P53973 PEX25YPL112C 1185 nt12.39□□□□□ -0.43
HDA1P53973 YLR415CYLR415C 339 nt12.36□□□□□ -0.43
HDA1P53973 SWC5YBR231C 912 nt12.36□□□□□ -0.43
HDA1P53973 YIR016WYIR016W 798 nt12.34□□□□□ -0.43
HDA1P53973 RRT5YFR032C 870 nt12.31□□□□□ -0.44
HDA1P53973 YHR056W-AYHR056W-A 435 nt12.31□□□□□ -0.44
HDA1P53973 YFL054CYFL054C 1941 nt12.3□□□□□ -0.44
HDA1P53973 SPT8YLR055C 1809 nt12.23□□□□□ -0.45
HDA1P53973 MIC12YBR262C 321 nt12.2□□□□□ -0.46
HDA1P53973 RAX1YOR301W 1308 nt12.15□□□□□ -0.46
HDA1P53973 SHM2YLR058C 1410 nt12.13□□□□□ -0.47
HDA1P53973 MIR1YJR077C 936 nt12.13□□□□□ -0.47
HDA1P53973 SBA1YKL117W 651 nt12.13□□□□□ -0.47
HDA1P53973 VPS75YNL246W 795 nt12.12□□□□□ -0.47
HDA1P53973 XDJ1YLR090W 1380 nt12.12□□□□□ -0.47
HDA1P53973 BNA2YJR078W 1362 nt12.11□□□□□ -0.47
HDA1P53973 AGP1YCL025C 1902 nt12.08□□□□□ -0.48
HDA1P53973 NIT1YIL164C 600 nt12.07□□□□□ -0.48
HDA1P53973 SWE1YJL187C 2460 nt12.07□□□□□ -0.48
HDA1P53973 CCA1YER168C 1641 nt12.06□□□□□ -0.48
HDA1P53973 TIM17YJL143W 477 nt12.05□□□□□ -0.48
HDA1P53973 DUT1YBR252W 444 nt12.05□□□□□ -0.48
HDA1P53973 HHO1YPL127C 777 nt12.04□□□□□ -0.48
HDA1P53973 GDH3YAL062W 1374 nt12.03□□□□□ -0.48
HDA1P53973 NAT4YMR069W 858 nt12.02□□□□□ -0.49
HDA1P53973 SGT2YOR007C 1041 nt12.01□□□□□ -0.49
HDA1P53973 THI74YDR438W 1113 nt12□□□□□ -0.49
HDA1P53973 GLK1YCL040W 1503 nt12□□□□□ -0.49
HDA1P53973 MSF1YPR047W 1410 nt11.99□□□□□ -0.49
HDA1P53973 YGR201CYGR201C 678 nt11.95□□□□□ -0.5
HDA1P53973 DAT1YML113W 747 nt11.95□□□□□ -0.5
HDA1P53973 YDR010CYDR010C 333 nt11.93□□□□□ -0.5
HDA1P53973 SHB17YKR043C 816 nt11.93□□□□□ -0.5
HDA1P53973 AVT6YER119C 1347 nt11.92□□□□□ -0.5
HDA1P53973 PAU7YAR020C 168 nt11.9□□□□□ -0.5
HDA1P53973 UBA4YHR111W 1323 nt11.89□□□□□ -0.51
HDA1P53973 YGL034CYGL034C 366 nt11.81□□□□□ -0.52
HDA1P53973 GOR1YNL274C 1053 nt11.81□□□□□ -0.52
HDA1P53973 XYL2YLR070C 1071 nt11.79□□□□□ -0.52
HDA1P53973 YSR3YKR053C 1215 nt11.78□□□□□ -0.52
HDA1P53973 RDN18-1RDN18-1 1800 nt11.76□□□□□ -0.53
HDA1P53973 RDN18-2RDN18-2 1800 nt11.76□□□□□ -0.53
HDA1P53973 RET2YFR051C 1641 nt11.75□□□□□ -0.53
HDA1P53973 PHO89YBR296C 1725 nt11.74□□□□□ -0.53
HDA1P53973 SHH4YLR164W 507 nt11.73□□□□□ -0.53
HDA1P53973 STR3YGL184C 1398 nt11.72□□□□□ -0.53
HDA1P53973 SFA1YDL168W 1161 nt11.72□□□□□ -0.53
HDA1P53973 DUS1YML080W 1272 nt11.71□□□□□ -0.53
HDA1P53973 PAC11YDR488C 1602 nt11.7□□□□□ -0.54
HDA1P53973 YCR102CYCR102C 1107 nt11.69□□□□□ -0.54
HDA1P53973 NBP35YGL091C 987 nt11.69□□□□□ -0.54
HDA1P53973 COQ2YNR041C 1119 nt11.66□□□□□ -0.54
HDA1P53973 FUR4YBR021W 1902 nt11.65□□□□□ -0.54
HDA1P53973 RBG1YAL036C 1110 nt11.65□□□□□ -0.54
HDA1P53973 YMR244WYMR244W 1068 nt11.65□□□□□ -0.54
HDA1P53973 AQY2YLL052C 450 nt11.63□□□□□ -0.55
HDA1P53973 YCL074WYCL074W 927 nt11.61□□□□□ -0.55
HDA1P53973 YHL019W-AYHL019W-A 594 nt11.61□□□□□ -0.55
HDA1P53973 NDI1YML120C 1542 nt11.6□□□□□ -0.55
HDA1P53973 AIM45YPR004C 1035 nt11.59□□□□□ -0.55
HDA1P53973 GLR1YPL091W 1452 nt11.56□□□□□ -0.56
HDA1P53973 YCR087WYCR087W 516 nt11.53□□□□□ -0.56
HDA1P53973 TIR3YIL011W 810 nt11.53□□□□□ -0.56
HDA1P53973 TOM6YOR045W 186 nt11.52□□□□□ -0.57
HDA1P53973 MRP20YDR405W 792 nt11.51□□□□□ -0.57
HDA1P53973 POM34YLR018C 900 nt11.51□□□□□ -0.57
HDA1P53973 PRO1YDR300C 1287 nt11.49□□□□□ -0.57
HDA1P53973 PEX2YJL210W 816 nt11.45□□□□□ -0.58
HDA1P53973 HSP60YLR259C 1719 nt11.45□□□□□ -0.58
HDA1P53973 HIP1YGR191W 1812 nt11.42□□□□□ -0.58
HDA1P53973 ARP6YLR085C 1317 nt11.41□□□□□ -0.58
HDA1P53973 PLB1YMR008C 1995 nt11.4□□□□□ -0.58
HDA1P53973 RPS14BYJL191W 417 nt11.4□□□□□ -0.58
HDA1P53973 CAB5YDR196C 726 nt11.39□□□□□ -0.59
Retrieved 100 of 7,029 protein–RNA pairs in 9.7 ms