Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.85■■□□□ 1.09
Lhx4P53776 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.84■■□□□ 1.09
Lhx4P53776 Gm24804-201ENSMUST00000174982 85 ntBASIC21.82■■□□□ 1.08
Lhx4P53776 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lhx4P53776 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lhx4P53776 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.78■■□□□ 1.08
Lhx4P53776 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lhx4P53776 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lhx4P53776 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lhx4P53776 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Lhx4P53776 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Lhx4P53776 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lhx4P53776 Mipep-204ENSMUST00000225043 1548 ntBASIC21.71■■□□□ 1.07
Lhx4P53776 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Lhx4P53776 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Lhx4P53776 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lhx4P53776 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lhx4P53776 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lhx4P53776 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lhx4P53776 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lhx4P53776 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lhx4P53776 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Lhx4P53776 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.61■■□□□ 1.05
Lhx4P53776 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Lhx4P53776 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Lhx4P53776 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.6■■□□□ 1.05
Lhx4P53776 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lhx4P53776 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lhx4P53776 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Lhx4P53776 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Lhx4P53776 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.56■■□□□ 1.04
Lhx4P53776 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Lhx4P53776 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lhx4P53776 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Lhx4P53776 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lhx4P53776 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.49■■□□□ 1.03
Lhx4P53776 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.49■■□□□ 1.03
Lhx4P53776 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Lhx4P53776 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lhx4P53776 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Lhx4P53776 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.46■■□□□ 1.03
Lhx4P53776 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lhx4P53776 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lhx4P53776 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lhx4P53776 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lhx4P53776 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lhx4P53776 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lhx4P53776 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lhx4P53776 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lhx4P53776 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Lhx4P53776 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lhx4P53776 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.37■■□□□ 1.01
Lhx4P53776 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lhx4P53776 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Lhx4P53776 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lhx4P53776 Peli2-204ENSMUST00000226513 1320 ntBASIC21.35■■□□□ 1.01
Lhx4P53776 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lhx4P53776 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Lhx4P53776 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lhx4P53776 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lhx4P53776 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Lhx4P53776 Gm16148-201ENSMUST00000119653 893 ntBASIC21.32■■□□□ 1
Lhx4P53776 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lhx4P53776 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.31■■□□□ 1
Lhx4P53776 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lhx4P53776 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lhx4P53776 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lhx4P53776 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Lhx4P53776 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.28■■□□□ 1
Lhx4P53776 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Lhx4P53776 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lhx4P53776 Zfp131-205ENSMUST00000223812 663 ntBASIC21.26■□□□□ 0.99
Lhx4P53776 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lhx4P53776 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lhx4P53776 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lhx4P53776 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lhx4P53776 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lhx4P53776 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lhx4P53776 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lhx4P53776 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lhx4P53776 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.21■□□□□ 0.99
Lhx4P53776 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.2■□□□□ 0.98
Lhx4P53776 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lhx4P53776 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lhx4P53776 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lhx4P53776 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Lhx4P53776 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lhx4P53776 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lhx4P53776 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lhx4P53776 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lhx4P53776 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.15■□□□□ 0.98
Lhx4P53776 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lhx4P53776 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lhx4P53776 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lhx4P53776 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lhx4P53776 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lhx4P53776 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lhx4P53776 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.11■□□□□ 0.97
Lhx4P53776 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lhx4P53776 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms