Protein–RNA interactions for Protein: P53617

NRD1, Protein NRD1, yeastyeast

Known RBP RIP-Chip data

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NRD1P53617 YGR139WYGR139W 339 nt11.17□□□□□ -0.62
NRD1P53617 tL(GAG)GtL(GAG)G 82 nt11.15□□□□□ -0.62
NRD1P53617 UBX6YJL048C 1191 nt11.15□□□□□ -0.62
NRD1P53617 TAD3YLR316C 969 nt11.15□□□□□ -0.62
NRD1P53617 YFL067WYFL067W 528 nt11.14□□□□□ -0.63
NRD1P53617 DDR2YOL052C-A 186 nt11.14□□□□□ -0.63 RIP-Chip
NRD1P53617 STB1YNL309W 1263 nt11.13□□□□□ -0.63
NRD1P53617 MIC10YCL057C-A 294 nt11.13□□□□□ -0.63
NRD1P53617 SPC25YER018C 666 nt11.12□□□□□ -0.63 RIP-Chip
NRD1P53617 SNG1YGR197C 1644 nt11.11□□□□□ -0.63
NRD1P53617 YDR524C-BYDR524C-B 201 nt11.1□□□□□ -0.63
NRD1P53617 YDL086C-AYDL086C-A 435 nt11.09□□□□□ -0.63
NRD1P53617 HEM12YDR047W 1089 nt11.09□□□□□ -0.63
NRD1P53617 VAR1Q0140 1197 nt11.09□□□□□ -0.63
NRD1P53617 YDR094WYDR094W 336 nt11.08□□□□□ -0.64
NRD1P53617 ANP1YEL036C 1503 nt11.07□□□□□ -0.64
NRD1P53617 CCT4YDL143W 1587 nt11.06□□□□□ -0.64
NRD1P53617 GPI16YHR188C 1833 nt11.05□□□□□ -0.64
NRD1P53617 VPS60YDR486C 690 nt11.04□□□□□ -0.64 RIP-Chip
NRD1P53617 BDH1YAL060W 1149 nt11.03□□□□□ -0.64 RIP-Chip
NRD1P53617 YFL054CYFL054C 1941 nt11.02□□□□□ -0.65
NRD1P53617 FEN2YCR028C 1539 nt11.02□□□□□ -0.65
NRD1P53617 ALG3YBL082C 1377 nt11.01□□□□□ -0.65
NRD1P53617 YHR056W-AYHR056W-A 435 nt10.98□□□□□ -0.65
NRD1P53617 YFR018CYFR018C 1092 nt10.97□□□□□ -0.65
NRD1P53617 YSP3YOR003W 1437 nt10.96□□□□□ -0.65
NRD1P53617 SWC5YBR231C 912 nt10.96□□□□□ -0.65
NRD1P53617 PRE6YOL038W 765 nt10.95□□□□□ -0.66
NRD1P53617 YLR415CYLR415C 339 nt10.94□□□□□ -0.66
NRD1P53617 YIR016WYIR016W 798 nt10.93□□□□□ -0.66
NRD1P53617 YFL066CYFL066C 1179 nt10.92□□□□□ -0.66
NRD1P53617 SPT8YLR055C 1809 nt10.91□□□□□ -0.66
NRD1P53617 PEX25YPL112C 1185 nt10.89□□□□□ -0.67
NRD1P53617 YNL115CYNL115C 1935 nt10.88□□□□□ -0.67
NRD1P53617 Q0182Q0182 405 nt10.88□□□□□ -0.67
NRD1P53617 RAX1YOR301W 1308 nt10.87□□□□□ -0.67 RIP-Chip
NRD1P53617 PAU16YKL224C 372 nt10.86□□□□□ -0.67
NRD1P53617 MIC12YBR262C 321 nt10.85□□□□□ -0.67 RIP-Chip
NRD1P53617 BNA2YJR078W 1362 nt10.82□□□□□ -0.68
NRD1P53617 YFL015W-AYFL015W-A 318 nt10.81□□□□□ -0.68
NRD1P53617 RRT5YFR032C 870 nt10.8□□□□□ -0.68
NRD1P53617 SWE1YJL187C 2460 nt10.8□□□□□ -0.68 RIP-Chip
NRD1P53617 YJL225CYJL225C 5277 nt10.78□□□□□ -0.68
NRD1P53617 XDJ1YLR090W 1380 nt10.75□□□□□ -0.69 RIP-Chip
NRD1P53617 CCA1YER168C 1641 nt10.74□□□□□ -0.69 RIP-Chip
NRD1P53617 HHO1YPL127C 777 nt10.72□□□□□ -0.69 RIP-Chip
NRD1P53617 SHM2YLR058C 1410 nt10.72□□□□□ -0.69
NRD1P53617 VPS75YNL246W 795 nt10.71□□□□□ -0.69
NRD1P53617 AGP1YCL025C 1902 nt10.7□□□□□ -0.7
NRD1P53617 TIM17YJL143W 477 nt10.69□□□□□ -0.7
NRD1P53617 YGR201CYGR201C 678 nt10.68□□□□□ -0.7
NRD1P53617 GDH3YAL062W 1374 nt10.66□□□□□ -0.7
NRD1P53617 NIT1YIL164C 600 nt10.63□□□□□ -0.71
NRD1P53617 MIR1YJR077C 936 nt10.63□□□□□ -0.71
NRD1P53617 DUT1YBR252W 444 nt10.62□□□□□ -0.71 RIP-Chip
NRD1P53617 SGT2YOR007C 1041 nt10.6□□□□□ -0.71
NRD1P53617 AVT6YER119C 1347 nt10.59□□□□□ -0.71 RIP-Chip
NRD1P53617 GLK1YCL040W 1503 nt10.55□□□□□ -0.72
NRD1P53617 NAT4YMR069W 858 nt10.54□□□□□ -0.72
NRD1P53617 THI74YDR438W 1113 nt10.53□□□□□ -0.72
NRD1P53617 UME6YDR207C 2511 nt10.52□□□□□ -0.72
NRD1P53617 PAU7YAR020C 168 nt10.52□□□□□ -0.73
NRD1P53617 GOR1YNL274C 1053 nt10.52□□□□□ -0.73
NRD1P53617 SHB17YKR043C 816 nt10.5□□□□□ -0.73
NRD1P53617 DAT1YML113W 747 nt10.5□□□□□ -0.73
NRD1P53617 MSF1YPR047W 1410 nt10.5□□□□□ -0.73
NRD1P53617 YDR010CYDR010C 333 nt10.48□□□□□ -0.73
NRD1P53617 DUS1YML080W 1272 nt10.48□□□□□ -0.73
NRD1P53617 UBA4YHR111W 1323 nt10.45□□□□□ -0.74
NRD1P53617 FUR4YBR021W 1902 nt10.44□□□□□ -0.74
NRD1P53617 RDN37-1RDN37-1 5354 nt10.44□□□□□ -0.74
NRD1P53617 RDN37-2RDN37-2 5354 nt10.44□□□□□ -0.74
NRD1P53617 STR3YGL184C 1398 nt10.43□□□□□ -0.74
NRD1P53617 RDN18-1RDN18-1 1800 nt10.42□□□□□ -0.74
NRD1P53617 RDN18-2RDN18-2 1800 nt10.42□□□□□ -0.74
NRD1P53617 SBA1YKL117W 651 nt10.41□□□□□ -0.74
NRD1P53617 YCL074WYCL074W 927 nt10.4□□□□□ -0.74
NRD1P53617 YCR102CYCR102C 1107 nt10.4□□□□□ -0.74
NRD1P53617 NBP35YGL091C 987 nt10.37□□□□□ -0.75
NRD1P53617 YSR3YKR053C 1215 nt10.37□□□□□ -0.75 RIP-Chip
NRD1P53617 RET2YFR051C 1641 nt10.36□□□□□ -0.75
NRD1P53617 AQY2YLL052C 450 nt10.36□□□□□ -0.75
NRD1P53617 YGL034CYGL034C 366 nt10.35□□□□□ -0.75
NRD1P53617 PHO89YBR296C 1725 nt10.33□□□□□ -0.76
NRD1P53617 XYL2YLR070C 1071 nt10.33□□□□□ -0.76
NRD1P53617 SFA1YDL168W 1161 nt10.31□□□□□ -0.76
NRD1P53617 SHH4YLR164W 507 nt10.31□□□□□ -0.76
NRD1P53617 HSP60YLR259C 1719 nt10.3□□□□□ -0.76
NRD1P53617 YHL019W-AYHL019W-A 594 nt10.25□□□□□ -0.77
NRD1P53617 COQ2YNR041C 1119 nt10.25□□□□□ -0.77 RIP-Chip
NRD1P53617 TIR3YIL011W 810 nt10.24□□□□□ -0.77
NRD1P53617 YDR509WYDR509W 348 nt10.23□□□□□ -0.77
NRD1P53617 YCR087WYCR087W 516 nt10.22□□□□□ -0.77
NRD1P53617 YKR005CYKR005C 1578 nt10.22□□□□□ -0.77
NRD1P53617 BOR1YNL275W 1731 nt10.21□□□□□ -0.77
NRD1P53617 AIM45YPR004C 1035 nt10.21□□□□□ -0.77 RIP-Chip
NRD1P53617 Q0017Q0017 162 nt10.21□□□□□ -0.77
NRD1P53617 RBG1YAL036C 1110 nt10.2□□□□□ -0.78
NRD1P53617 PRP4YPR178W 1398 nt10.19□□□□□ -0.78
NRD1P53617 POM34YLR018C 900 nt10.18□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms