Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 DDR2YOL052C-A 186 nt11.31□□□□□ -0.6
RFX1P48743 AQY1YPR192W 918 nt11.31□□□□□ -0.6
RFX1P48743 BOR1YNL275W 1731 nt11.31□□□□□ -0.6
RFX1P48743 YPR064WYPR064W 420 nt11.29□□□□□ -0.6
RFX1P48743 WSC2YNL283C 1512 nt11.26□□□□□ -0.61
RFX1P48743 AHT1YHR093W 549 nt11.26□□□□□ -0.61
RFX1P48743 YFL054CYFL054C 1941 nt11.26□□□□□ -0.61
RFX1P48743 HEM12YDR047W 1089 nt11.25□□□□□ -0.61
RFX1P48743 STB1YNL309W 1263 nt11.23□□□□□ -0.61
RFX1P48743 MIC10YCL057C-A 294 nt11.23□□□□□ -0.61
RFX1P48743 YDL086C-AYDL086C-A 435 nt11.22□□□□□ -0.61
RFX1P48743 SNG1YGR197C 1644 nt11.22□□□□□ -0.61
RFX1P48743 YDR524C-BYDR524C-B 201 nt11.21□□□□□ -0.61
RFX1P48743 TAD3YLR316C 969 nt11.21□□□□□ -0.61
RFX1P48743 SPC25YER018C 666 nt11.2□□□□□ -0.62
RFX1P48743 tL(GAG)GtL(GAG)G 82 nt11.17□□□□□ -0.62
RFX1P48743 GPI16YHR188C 1833 nt11.16□□□□□ -0.62
RFX1P48743 RDN37-1RDN37-1 5354 nt11.16□□□□□ -0.62
RFX1P48743 RDN37-2RDN37-2 5354 nt11.16□□□□□ -0.62
RFX1P48743 CCT4YDL143W 1587 nt11.16□□□□□ -0.62
RFX1P48743 ANP1YEL036C 1503 nt11.15□□□□□ -0.62
RFX1P48743 FEN2YCR028C 1539 nt11.14□□□□□ -0.63
RFX1P48743 SPT8YLR055C 1809 nt11.12□□□□□ -0.63
RFX1P48743 VPS60YDR486C 690 nt11.12□□□□□ -0.63
RFX1P48743 YHR056W-AYHR056W-A 435 nt11.12□□□□□ -0.63
RFX1P48743 SWC5YBR231C 912 nt11.1□□□□□ -0.63
RFX1P48743 RAX1YOR301W 1308 nt11.06□□□□□ -0.64
RFX1P48743 ALG3YBL082C 1377 nt11.05□□□□□ -0.64
RFX1P48743 BNA2YJR078W 1362 nt11.04□□□□□ -0.64
RFX1P48743 YIR016WYIR016W 798 nt11.04□□□□□ -0.64
RFX1P48743 BDH1YAL060W 1149 nt11.03□□□□□ -0.64
RFX1P48743 MCH5YOR306C 1566 nt11.03□□□□□ -0.64
RFX1P48743 YLR415CYLR415C 339 nt11.02□□□□□ -0.65
RFX1P48743 SWE1YJL187C 2460 nt10.98□□□□□ -0.65
RFX1P48743 YDR094WYDR094W 336 nt10.97□□□□□ -0.65
RFX1P48743 UBX6YJL048C 1191 nt10.97□□□□□ -0.65
RFX1P48743 HSP60YLR259C 1719 nt10.96□□□□□ -0.65
RFX1P48743 YSP3YOR003W 1437 nt10.95□□□□□ -0.66
RFX1P48743 MIC12YBR262C 321 nt10.94□□□□□ -0.66
RFX1P48743 YFR018CYFR018C 1092 nt10.92□□□□□ -0.66
RFX1P48743 ALG12YNR030W 1656 nt10.92□□□□□ -0.66
RFX1P48743 HHO1YPL127C 777 nt10.91□□□□□ -0.66
RFX1P48743 YNL115CYNL115C 1935 nt10.9□□□□□ -0.66
RFX1P48743 YFL066CYFL066C 1179 nt10.9□□□□□ -0.66
RFX1P48743 CCA1YER168C 1641 nt10.89□□□□□ -0.67
RFX1P48743 PEX25YPL112C 1185 nt10.89□□□□□ -0.67
RFX1P48743 PRE6YOL038W 765 nt10.86□□□□□ -0.67
RFX1P48743 XDJ1YLR090W 1380 nt10.85□□□□□ -0.67
RFX1P48743 RRT5YFR032C 870 nt10.82□□□□□ -0.68
RFX1P48743 YGR201CYGR201C 678 nt10.82□□□□□ -0.68
RFX1P48743 TIM17YJL143W 477 nt10.82□□□□□ -0.68
RFX1P48743 GDH3YAL062W 1374 nt10.8□□□□□ -0.68
RFX1P48743 SHM2YLR058C 1410 nt10.8□□□□□ -0.68
RFX1P48743 AGP1YCL025C 1902 nt10.78□□□□□ -0.68
RFX1P48743 PAU16YKL224C 372 nt10.77□□□□□ -0.69
RFX1P48743 GLK1YCL040W 1503 nt10.76□□□□□ -0.69
RFX1P48743 VPS75YNL246W 795 nt10.75□□□□□ -0.69
RFX1P48743 AVT6YER119C 1347 nt10.75□□□□□ -0.69
RFX1P48743 DUS1YML080W 1272 nt10.71□□□□□ -0.69
RFX1P48743 GOR1YNL274C 1053 nt10.71□□□□□ -0.69
RFX1P48743 DUT1YBR252W 444 nt10.7□□□□□ -0.7
RFX1P48743 NIT1YIL164C 600 nt10.68□□□□□ -0.7
RFX1P48743 SGT2YOR007C 1041 nt10.67□□□□□ -0.7
RFX1P48743 PAU7YAR020C 168 nt10.65□□□□□ -0.7
RFX1P48743 FUR4YBR021W 1902 nt10.64□□□□□ -0.71
RFX1P48743 YFL015W-AYFL015W-A 318 nt10.61□□□□□ -0.71
RFX1P48743 NAR1YNL240C 1476 nt10.61□□□□□ -0.71
RFX1P48743 YCL074WYCL074W 927 nt10.6□□□□□ -0.71
RFX1P48743 MIR1YJR077C 936 nt10.59□□□□□ -0.71
RFX1P48743 DAT1YML113W 747 nt10.58□□□□□ -0.72
RFX1P48743 STR3YGL184C 1398 nt10.56□□□□□ -0.72
RFX1P48743 NAT4YMR069W 858 nt10.56□□□□□ -0.72
RFX1P48743 YCR102CYCR102C 1107 nt10.54□□□□□ -0.72
RFX1P48743 THI74YDR438W 1113 nt10.54□□□□□ -0.72
RFX1P48743 AQY2YLL052C 450 nt10.54□□□□□ -0.72
RFX1P48743 RDN18-1RDN18-1 1800 nt10.54□□□□□ -0.72
RFX1P48743 RDN18-2RDN18-2 1800 nt10.54□□□□□ -0.72
RFX1P48743 SHB17YKR043C 816 nt10.52□□□□□ -0.73
RFX1P48743 PRP4YPR178W 1398 nt10.52□□□□□ -0.73
RFX1P48743 AAC1YMR056C 930 nt10.51□□□□□ -0.73
RFX1P48743 MSF1YPR047W 1410 nt10.49□□□□□ -0.73
RFX1P48743 YDR010CYDR010C 333 nt10.48□□□□□ -0.73
RFX1P48743 UBA4YHR111W 1323 nt10.47□□□□□ -0.73
RFX1P48743 NBP35YGL091C 987 nt10.46□□□□□ -0.73
RFX1P48743 DPS1YLL018C 1674 nt10.46□□□□□ -0.74
RFX1P48743 BIO5YNR056C 1686 nt10.43□□□□□ -0.74
RFX1P48743 YSR3YKR053C 1215 nt10.42□□□□□ -0.74
RFX1P48743 YKR005CYKR005C 1578 nt10.42□□□□□ -0.74
RFX1P48743 RET2YFR051C 1641 nt10.4□□□□□ -0.74
RFX1P48743 PBP1YGR178C 2169 nt10.39□□□□□ -0.75
RFX1P48743 PHO89YBR296C 1725 nt10.39□□□□□ -0.75
RFX1P48743 YGR259CYGR259C 441 nt10.39□□□□□ -0.75
RFX1P48743 YGL034CYGL034C 366 nt10.36□□□□□ -0.75
RFX1P48743 SNF1YDR477W 1902 nt10.36□□□□□ -0.75
RFX1P48743 TIR3YIL011W 810 nt10.35□□□□□ -0.75
RFX1P48743 CYT2YKL087C 675 nt10.35□□□□□ -0.75
RFX1P48743 BMT6YLR063W 1098 nt10.35□□□□□ -0.75
RFX1P48743 XYL2YLR070C 1071 nt10.35□□□□□ -0.75
RFX1P48743 SFA1YDL168W 1161 nt10.34□□□□□ -0.75
RFX1P48743 RTN2YDL204W 1182 nt10.34□□□□□ -0.75
Retrieved 100 of 7,029 protein–RNA pairs in 10.1 ms