Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 RNQ1YCL028W 1218 nt11.2□□□□□ -0.62
MSH2P25847 YLL053CYLL053C 459 nt11.19□□□□□ -0.62
MSH2P25847 DIC1YLR348C 897 nt11.18□□□□□ -0.62
MSH2P25847 ERF2YLR246W 1080 nt11.15□□□□□ -0.62
MSH2P25847 YPR064WYPR064W 420 nt11.14□□□□□ -0.63
MSH2P25847 BOR1YNL275W 1731 nt11.13□□□□□ -0.63
MSH2P25847 LYS4YDR234W 2082 nt11.12□□□□□ -0.63
MSH2P25847 YLR179CYLR179C 606 nt11.12□□□□□ -0.63
MSH2P25847 CRR1YLR213C 1269 nt11.1□□□□□ -0.63
MSH2P25847 TAD3YLR316C 969 nt11.1□□□□□ -0.63
MSH2P25847 FTR1YER145C 1215 nt11.09□□□□□ -0.63
MSH2P25847 RPM1RPM1 483 nt11.08□□□□□ -0.64
MSH2P25847 NME1NME1 340 nt11.08□□□□□ -0.64
MSH2P25847 SPT8YLR055C 1809 nt11.07□□□□□ -0.64
MSH2P25847 ATF2YGR177C 1608 nt11.06□□□□□ -0.64
MSH2P25847 TRM5YHR070W 1500 nt11.05□□□□□ -0.64
MSH2P25847 WSC2YNL283C 1512 nt11.05□□□□□ -0.64
MSH2P25847 AHT1YHR093W 549 nt11.05□□□□□ -0.64
MSH2P25847 GAL1YBR020W 1587 nt11.04□□□□□ -0.64
MSH2P25847 NAT4YMR069W 858 nt11.04□□□□□ -0.64
MSH2P25847 HEM12YDR047W 1089 nt11.03□□□□□ -0.64
MSH2P25847 YFL067WYFL067W 528 nt11.03□□□□□ -0.64
MSH2P25847 PEX25YPL112C 1185 nt11.03□□□□□ -0.64
MSH2P25847 YFL066CYFL066C 1179 nt11.02□□□□□ -0.65
MSH2P25847 DDR2YOL052C-A 186 nt11.02□□□□□ -0.65
MSH2P25847 MIC10YCL057C-A 294 nt11.01□□□□□ -0.65
MSH2P25847 MCH5YOR306C 1566 nt11.01□□□□□ -0.65
MSH2P25847 FRE6YLL051C 2139 nt10.97□□□□□ -0.65
MSH2P25847 SNG1YGR197C 1644 nt10.97□□□□□ -0.65
MSH2P25847 AQY1YPR192W 918 nt10.95□□□□□ -0.66
MSH2P25847 YHR056W-AYHR056W-A 435 nt10.94□□□□□ -0.66
MSH2P25847 YDL086C-AYDL086C-A 435 nt10.93□□□□□ -0.66
MSH2P25847 GLK1YCL040W 1503 nt10.93□□□□□ -0.66
MSH2P25847 SWE1YJL187C 2460 nt10.93□□□□□ -0.66
MSH2P25847 YSP3YOR003W 1437 nt10.92□□□□□ -0.66
MSH2P25847 STB1YNL309W 1263 nt10.91□□□□□ -0.66
MSH2P25847 MSF1YPR047W 1410 nt10.91□□□□□ -0.66
MSH2P25847 YDR524C-BYDR524C-B 201 nt10.9□□□□□ -0.66
MSH2P25847 BDH1YAL060W 1149 nt10.9□□□□□ -0.66
MSH2P25847 RAX1YOR301W 1308 nt10.88□□□□□ -0.67
MSH2P25847 YNL115CYNL115C 1935 nt10.88□□□□□ -0.67
MSH2P25847 YMR244WYMR244W 1068 nt10.88□□□□□ -0.67
MSH2P25847 ANP1YEL036C 1503 nt10.85□□□□□ -0.67
MSH2P25847 SPC25YER018C 666 nt10.85□□□□□ -0.67
MSH2P25847 MIR1YJR077C 936 nt10.84□□□□□ -0.67
MSH2P25847 GPI16YHR188C 1833 nt10.84□□□□□ -0.67
MSH2P25847 THI74YDR438W 1113 nt10.83□□□□□ -0.68
MSH2P25847 YLR415CYLR415C 339 nt10.83□□□□□ -0.68
MSH2P25847 FEN2YCR028C 1539 nt10.83□□□□□ -0.68
MSH2P25847 BNA2YJR078W 1362 nt10.82□□□□□ -0.68
MSH2P25847 CCT4YDL143W 1587 nt10.8□□□□□ -0.68
MSH2P25847 VPS60YDR486C 690 nt10.79□□□□□ -0.68
MSH2P25847 SWC5YBR231C 912 nt10.78□□□□□ -0.68
MSH2P25847 CCA1YER168C 1641 nt10.76□□□□□ -0.69
MSH2P25847 VPS75YNL246W 795 nt10.76□□□□□ -0.69
MSH2P25847 ALG12YNR030W 1656 nt10.75□□□□□ -0.69
MSH2P25847 GLR1YPL091W 1452 nt10.74□□□□□ -0.69
MSH2P25847 YIR016WYIR016W 798 nt10.73□□□□□ -0.69
MSH2P25847 ALG3YBL082C 1377 nt10.73□□□□□ -0.69
MSH2P25847 HSP60YLR259C 1719 nt10.71□□□□□ -0.69
MSH2P25847 MIC12YBR262C 321 nt10.7□□□□□ -0.7
MSH2P25847 DAT1YML113W 747 nt10.68□□□□□ -0.7
MSH2P25847 HHO1YPL127C 777 nt10.68□□□□□ -0.7
MSH2P25847 RBG2YGR173W 1107 nt10.67□□□□□ -0.7
MSH2P25847 YGL034CYGL034C 366 nt10.62□□□□□ -0.71
MSH2P25847 FUR4YBR021W 1902 nt10.62□□□□□ -0.71
MSH2P25847 DUS1YML080W 1272 nt10.6□□□□□ -0.71
MSH2P25847 AGP1YCL025C 1902 nt10.58□□□□□ -0.72
MSH2P25847 UBA4YHR111W 1323 nt10.57□□□□□ -0.72
MSH2P25847 XDJ1YLR090W 1380 nt10.56□□□□□ -0.72
MSH2P25847 YGR201CYGR201C 678 nt10.56□□□□□ -0.72
MSH2P25847 PAU7YAR020C 168 nt10.54□□□□□ -0.72
MSH2P25847 NDI1YML120C 1542 nt10.53□□□□□ -0.72
MSH2P25847 GDH3YAL062W 1374 nt10.52□□□□□ -0.72
MSH2P25847 AVT6YER119C 1347 nt10.51□□□□□ -0.73
MSH2P25847 SHB17YKR043C 816 nt10.48□□□□□ -0.73
MSH2P25847 YSR3YKR053C 1215 nt10.48□□□□□ -0.73
MSH2P25847 DUT1YBR252W 444 nt10.48□□□□□ -0.73
MSH2P25847 YCL074WYCL074W 927 nt10.47□□□□□ -0.73
MSH2P25847 TIM17YJL143W 477 nt10.47□□□□□ -0.73
MSH2P25847 GOR1YNL274C 1053 nt10.47□□□□□ -0.73
MSH2P25847 SHM2YLR058C 1410 nt10.47□□□□□ -0.73
MSH2P25847 YMR226CYMR226C 804 nt10.46□□□□□ -0.73
MSH2P25847 RBG1YAL036C 1110 nt10.45□□□□□ -0.74
MSH2P25847 PRP4YPR178W 1398 nt10.44□□□□□ -0.74
MSH2P25847 XYL2YLR070C 1071 nt10.44□□□□□ -0.74
MSH2P25847 NAR1YNL240C 1476 nt10.42□□□□□ -0.74
MSH2P25847 SAM1YLR180W 1149 nt10.42□□□□□ -0.74
MSH2P25847 YDR010CYDR010C 333 nt10.41□□□□□ -0.74
MSH2P25847 AQY2YLL052C 450 nt10.4□□□□□ -0.74
MSH2P25847 YCR087WYCR087W 516 nt10.38□□□□□ -0.75
MSH2P25847 YKR005CYKR005C 1578 nt10.38□□□□□ -0.75
MSH2P25847 AAC1YMR056C 930 nt10.37□□□□□ -0.75
MSH2P25847 STR3YGL184C 1398 nt10.37□□□□□ -0.75
MSH2P25847 BMT6YLR063W 1098 nt10.36□□□□□ -0.75
MSH2P25847 RDN18-1RDN18-1 1800 nt10.35□□□□□ -0.75
MSH2P25847 RDN18-2RDN18-2 1800 nt10.35□□□□□ -0.75
MSH2P25847 DPS1YLL018C 1674 nt10.35□□□□□ -0.75
MSH2P25847 AIM45YPR004C 1035 nt10.35□□□□□ -0.75
MSH2P25847 RET2YFR051C 1641 nt10.34□□□□□ -0.75
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms