Protein–RNA interactions for Protein: P16646

Pmp22, Peripheral myelin protein 22, mousemouse

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pmp22P16646 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Pmp22P16646 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pmp22P16646 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
Pmp22P16646 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.59■■□□□ 1.53
Pmp22P16646 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Pmp22P16646 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.57■■□□□ 1.52
Pmp22P16646 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pmp22P16646 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pmp22P16646 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pmp22P16646 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pmp22P16646 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pmp22P16646 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Pmp22P16646 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pmp22P16646 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pmp22P16646 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pmp22P16646 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pmp22P16646 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pmp22P16646 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pmp22P16646 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.42■■□□□ 1.5
Pmp22P16646 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.41■■□□□ 1.5
Pmp22P16646 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pmp22P16646 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pmp22P16646 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pmp22P16646 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pmp22P16646 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.37■■□□□ 1.49
Pmp22P16646 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pmp22P16646 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pmp22P16646 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pmp22P16646 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pmp22P16646 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Pmp22P16646 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pmp22P16646 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pmp22P16646 Gm24804-201ENSMUST00000174982 85 ntBASIC24.27■■□□□ 1.48
Pmp22P16646 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pmp22P16646 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pmp22P16646 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pmp22P16646 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Pmp22P16646 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
Pmp22P16646 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.22■■□□□ 1.47
Pmp22P16646 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pmp22P16646 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Pmp22P16646 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Pmp22P16646 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pmp22P16646 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Pmp22P16646 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pmp22P16646 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pmp22P16646 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pmp22P16646 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pmp22P16646 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pmp22P16646 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Pmp22P16646 Peli2-204ENSMUST00000226513 1320 ntBASIC24.17■■□□□ 1.46
Pmp22P16646 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Pmp22P16646 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.15■■□□□ 1.46
Pmp22P16646 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pmp22P16646 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pmp22P16646 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Pmp22P16646 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.13■■□□□ 1.45
Pmp22P16646 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pmp22P16646 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pmp22P16646 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.11■■□□□ 1.45
Pmp22P16646 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Pmp22P16646 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.09■■□□□ 1.45
Pmp22P16646 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Pmp22P16646 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Pmp22P16646 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pmp22P16646 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.04■■□□□ 1.44
Pmp22P16646 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.04■■□□□ 1.44
Pmp22P16646 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Pmp22P16646 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Pmp22P16646 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pmp22P16646 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pmp22P16646 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pmp22P16646 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.98■■□□□ 1.43
Pmp22P16646 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pmp22P16646 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pmp22P16646 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pmp22P16646 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pmp22P16646 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pmp22P16646 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pmp22P16646 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Pmp22P16646 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.94■■□□□ 1.42
Pmp22P16646 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pmp22P16646 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Pmp22P16646 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Pmp22P16646 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pmp22P16646 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Pmp22P16646 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pmp22P16646 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pmp22P16646 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
Pmp22P16646 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Pmp22P16646 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
Pmp22P16646 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pmp22P16646 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pmp22P16646 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pmp22P16646 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pmp22P16646 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Pmp22P16646 Gm16148-201ENSMUST00000119653 893 ntBASIC23.87■■□□□ 1.41
Pmp22P16646 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pmp22P16646 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pmp22P16646 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms