Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
P04940 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
P04940 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
P04940 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
P04940 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
P04940 Gm26115-201ENSMUST00000175605 87 ntBASIC21.45■■□□□ 1.02
P04940 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
P04940 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
P04940 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
P04940 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
P04940 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
P04940 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
P04940 Gm8109-201ENSMUST00000194076 746 ntBASIC21.38■■□□□ 1.01
P04940 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
P04940 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
P04940 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
P04940 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
P04940 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
P04940 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.33■■□□□ 1
P04940 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
P04940 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
P04940 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
P04940 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.28■■□□□ 1
P04940 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
P04940 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
P04940 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
P04940 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
P04940 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
P04940 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
P04940 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
P04940 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
P04940 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
P04940 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
P04940 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.19■□□□□ 0.98
P04940 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P04940 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
P04940 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.16■□□□□ 0.98
P04940 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
P04940 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
P04940 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
P04940 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
P04940 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
P04940 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
P04940 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
P04940 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
P04940 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.11■□□□□ 0.97
P04940 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
P04940 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
P04940 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.1■□□□□ 0.97
P04940 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
P04940 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
P04940 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
P04940 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
P04940 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.07■□□□□ 0.96
P04940 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P04940 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
P04940 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P04940 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
P04940 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
P04940 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
P04940 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
P04940 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
P04940 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P04940 Peli2-204ENSMUST00000226513 1320 ntBASIC21.01■□□□□ 0.95
P04940 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
P04940 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21■□□□□ 0.95
P04940 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P04940 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P04940 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
P04940 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P04940 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.97■□□□□ 0.95
P04940 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04940 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.97■□□□□ 0.95
P04940 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04940 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
P04940 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
P04940 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
P04940 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
P04940 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
P04940 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
P04940 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
P04940 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.92■□□□□ 0.94
P04940 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04940 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04940 Gm24804-201ENSMUST00000174982 85 ntBASIC20.89■□□□□ 0.93
P04940 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.89■□□□□ 0.93
P04940 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04940 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
P04940 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04940 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04940 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04940 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
P04940 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
P04940 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
P04940 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
P04940 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
P04940 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04940 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04940 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
P04940 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms