Protein–RNA interactions for Protein: O35228

Ebi3, Interleukin-27 subunit beta, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebi3O35228 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ebi3O35228 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ebi3O35228 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.1■□□□□ 0.81
Ebi3O35228 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ebi3O35228 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Ebi3O35228 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ebi3O35228 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.07■□□□□ 0.8
Ebi3O35228 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.07■□□□□ 0.8
Ebi3O35228 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ebi3O35228 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.06■□□□□ 0.8
Ebi3O35228 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ebi3O35228 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.03■□□□□ 0.8
Ebi3O35228 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ebi3O35228 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Ebi3O35228 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ebi3O35228 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ebi3O35228 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ebi3O35228 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
Ebi3O35228 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20■□□□□ 0.79
Ebi3O35228 Gm27322-201ENSMUST00000184007 104 ntBASIC19.99■□□□□ 0.79
Ebi3O35228 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ebi3O35228 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.98■□□□□ 0.79
Ebi3O35228 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Ebi3O35228 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ebi3O35228 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ebi3O35228 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ebi3O35228 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ebi3O35228 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ebi3O35228 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Ebi3O35228 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ebi3O35228 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Ebi3O35228 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ebi3O35228 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ebi3O35228 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ebi3O35228 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.93■□□□□ 0.78
Ebi3O35228 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ebi3O35228 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ebi3O35228 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.9■□□□□ 0.78
Ebi3O35228 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ebi3O35228 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ebi3O35228 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ebi3O35228 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ebi3O35228 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ebi3O35228 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ebi3O35228 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ebi3O35228 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ebi3O35228 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ebi3O35228 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ebi3O35228 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ebi3O35228 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ebi3O35228 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ebi3O35228 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ebi3O35228 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ebi3O35228 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ebi3O35228 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ebi3O35228 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ebi3O35228 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ebi3O35228 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ebi3O35228 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ebi3O35228 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ebi3O35228 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ebi3O35228 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ebi3O35228 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ebi3O35228 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ebi3O35228 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ebi3O35228 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ebi3O35228 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ebi3O35228 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ebi3O35228 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ebi3O35228 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebi3O35228 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.7■□□□□ 0.74
Ebi3O35228 Gm26115-201ENSMUST00000175605 87 ntBASIC19.7■□□□□ 0.74
Ebi3O35228 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ebi3O35228 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ebi3O35228 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
Ebi3O35228 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ebi3O35228 Gm8109-201ENSMUST00000194076 746 ntBASIC19.67■□□□□ 0.74
Ebi3O35228 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebi3O35228 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ebi3O35228 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ebi3O35228 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.64■□□□□ 0.73
Ebi3O35228 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ebi3O35228 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ebi3O35228 Zxda-201ENSMUST00000117281 2621 ntBASIC19.63■□□□□ 0.73
Ebi3O35228 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ebi3O35228 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ebi3O35228 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.62■□□□□ 0.73
Ebi3O35228 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebi3O35228 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ebi3O35228 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
Ebi3O35228 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Ebi3O35228 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ebi3O35228 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ebi3O35228 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ebi3O35228 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.58■□□□□ 0.72
Ebi3O35228 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ebi3O35228 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.57■□□□□ 0.72
Ebi3O35228 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ebi3O35228 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.56■□□□□ 0.72
Ebi3O35228 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms