Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.01■□□□□ 0.47
Igkv3-9A0A140T8P4 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.01■□□□□ 0.47
Igkv3-9A0A140T8P4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv3-9A0A140T8P4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Igkv3-9A0A140T8P4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.99■□□□□ 0.47
Igkv3-9A0A140T8P4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.98■□□□□ 0.47
Igkv3-9A0A140T8P4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv3-9A0A140T8P4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.98■□□□□ 0.47
Igkv3-9A0A140T8P4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv3-9A0A140T8P4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv3-9A0A140T8P4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv3-9A0A140T8P4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv3-9A0A140T8P4 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.95■□□□□ 0.46
Igkv3-9A0A140T8P4 Gm27322-201ENSMUST00000184007 104 ntBASIC17.94■□□□□ 0.46
Igkv3-9A0A140T8P4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Igkv3-9A0A140T8P4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv3-9A0A140T8P4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Igkv3-9A0A140T8P4 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.91■□□□□ 0.46
Igkv3-9A0A140T8P4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv3-9A0A140T8P4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Igkv3-9A0A140T8P4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv3-9A0A140T8P4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC17.88■□□□□ 0.45
Igkv3-9A0A140T8P4 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.85■□□□□ 0.45
Igkv3-9A0A140T8P4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Igkv3-9A0A140T8P4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Igkv3-9A0A140T8P4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
Igkv3-9A0A140T8P4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv3-9A0A140T8P4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv3-9A0A140T8P4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv3-9A0A140T8P4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.81■□□□□ 0.44
Igkv3-9A0A140T8P4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv3-9A0A140T8P4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv3-9A0A140T8P4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv3-9A0A140T8P4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv3-9A0A140T8P4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv3-9A0A140T8P4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv3-9A0A140T8P4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv3-9A0A140T8P4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv3-9A0A140T8P4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Igkv3-9A0A140T8P4 Gm26115-201ENSMUST00000175605 87 ntBASIC17.75■□□□□ 0.43
Igkv3-9A0A140T8P4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv3-9A0A140T8P4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv3-9A0A140T8P4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv3-9A0A140T8P4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv3-9A0A140T8P4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv3-9A0A140T8P4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.7■□□□□ 0.42
Igkv3-9A0A140T8P4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv3-9A0A140T8P4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv3-9A0A140T8P4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv3-9A0A140T8P4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Igkv3-9A0A140T8P4 Gm8109-201ENSMUST00000194076 746 ntBASIC17.68■□□□□ 0.42
Igkv3-9A0A140T8P4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Igkv3-9A0A140T8P4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.68■□□□□ 0.42
Igkv3-9A0A140T8P4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Igkv3-9A0A140T8P4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv3-9A0A140T8P4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv3-9A0A140T8P4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.65■□□□□ 0.42
Igkv3-9A0A140T8P4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv3-9A0A140T8P4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Igkv3-9A0A140T8P4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv3-9A0A140T8P4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.64■□□□□ 0.41
Igkv3-9A0A140T8P4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv3-9A0A140T8P4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv3-9A0A140T8P4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv3-9A0A140T8P4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv3-9A0A140T8P4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv3-9A0A140T8P4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv3-9A0A140T8P4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv3-9A0A140T8P4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv3-9A0A140T8P4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv3-9A0A140T8P4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv3-9A0A140T8P4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv3-9A0A140T8P4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv3-9A0A140T8P4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igkv3-9A0A140T8P4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igkv3-9A0A140T8P4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igkv3-9A0A140T8P4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Igkv3-9A0A140T8P4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv3-9A0A140T8P4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv3-9A0A140T8P4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv3-9A0A140T8P4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv3-9A0A140T8P4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv3-9A0A140T8P4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv3-9A0A140T8P4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv3-9A0A140T8P4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv3-9A0A140T8P4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv3-9A0A140T8P4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Igkv3-9A0A140T8P4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv3-9A0A140T8P4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv3-9A0A140T8P4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.54■□□□□ 0.4
Igkv3-9A0A140T8P4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv3-9A0A140T8P4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv3-9A0A140T8P4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv3-9A0A140T8P4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv3-9A0A140T8P4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv3-9A0A140T8P4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv3-9A0A140T8P4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv3-9A0A140T8P4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv3-9A0A140T8P4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv3-9A0A140T8P4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 126.7 ms