Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC16.94■□□□□ 0.3
Igkv1-88A0A140T8N1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Igkv1-88A0A140T8N1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Igkv1-88A0A140T8N1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Igkv1-88A0A140T8N1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Igkv1-88A0A140T8N1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Igkv1-88A0A140T8N1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC16.9■□□□□ 0.3
Igkv1-88A0A140T8N1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv1-88A0A140T8N1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv1-88A0A140T8N1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv1-88A0A140T8N1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv1-88A0A140T8N1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Igkv1-88A0A140T8N1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv1-88A0A140T8N1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv1-88A0A140T8N1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.86■□□□□ 0.29
Igkv1-88A0A140T8N1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv1-88A0A140T8N1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv1-88A0A140T8N1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv1-88A0A140T8N1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv1-88A0A140T8N1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Igkv1-88A0A140T8N1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv1-88A0A140T8N1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv1-88A0A140T8N1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv1-88A0A140T8N1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Igkv1-88A0A140T8N1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv1-88A0A140T8N1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv1-88A0A140T8N1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv1-88A0A140T8N1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv1-88A0A140T8N1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv1-88A0A140T8N1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv1-88A0A140T8N1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv1-88A0A140T8N1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Igkv1-88A0A140T8N1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv1-88A0A140T8N1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv1-88A0A140T8N1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Igkv1-88A0A140T8N1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC16.76■□□□□ 0.27
Igkv1-88A0A140T8N1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Igkv1-88A0A140T8N1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.76■□□□□ 0.27
Igkv1-88A0A140T8N1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv1-88A0A140T8N1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv1-88A0A140T8N1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv1-88A0A140T8N1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv1-88A0A140T8N1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Igkv1-88A0A140T8N1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv1-88A0A140T8N1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv1-88A0A140T8N1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv1-88A0A140T8N1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv1-88A0A140T8N1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv1-88A0A140T8N1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Igkv1-88A0A140T8N1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Igkv1-88A0A140T8N1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC16.72■□□□□ 0.27
Igkv1-88A0A140T8N1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv1-88A0A140T8N1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv1-88A0A140T8N1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv1-88A0A140T8N1 AL845457.1-201ENSMUST00000197244 68 ntBASIC16.7■□□□□ 0.26
Igkv1-88A0A140T8N1 Mipep-204ENSMUST00000225043 1548 ntBASIC16.7■□□□□ 0.26
Igkv1-88A0A140T8N1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv1-88A0A140T8N1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv1-88A0A140T8N1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv1-88A0A140T8N1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv1-88A0A140T8N1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv1-88A0A140T8N1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv1-88A0A140T8N1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv1-88A0A140T8N1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv1-88A0A140T8N1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv1-88A0A140T8N1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Igkv1-88A0A140T8N1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv1-88A0A140T8N1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.65■□□□□ 0.26
Igkv1-88A0A140T8N1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Igkv1-88A0A140T8N1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv1-88A0A140T8N1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC16.64■□□□□ 0.25
Igkv1-88A0A140T8N1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv1-88A0A140T8N1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv1-88A0A140T8N1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv1-88A0A140T8N1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv1-88A0A140T8N1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv1-88A0A140T8N1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Igkv1-88A0A140T8N1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv1-88A0A140T8N1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC16.6■□□□□ 0.25
Igkv1-88A0A140T8N1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv1-88A0A140T8N1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv1-88A0A140T8N1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv1-88A0A140T8N1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv1-88A0A140T8N1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv1-88A0A140T8N1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv1-88A0A140T8N1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv1-88A0A140T8N1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv1-88A0A140T8N1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv1-88A0A140T8N1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC16.54■□□□□ 0.24
Igkv1-88A0A140T8N1 Gm25262-201ENSMUST00000174934 133 ntBASIC16.54■□□□□ 0.24
Igkv1-88A0A140T8N1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv1-88A0A140T8N1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv1-88A0A140T8N1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv1-88A0A140T8N1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv1-88A0A140T8N1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Igkv1-88A0A140T8N1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Igkv1-88A0A140T8N1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv1-88A0A140T8N1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv1-88A0A140T8N1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv1-88A0A140T8N1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms