Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-11A0A0A6YWI9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ighv1-11A0A0A6YWI9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-11A0A0A6YWI9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-11A0A0A6YWI9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-11A0A0A6YWI9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-11A0A0A6YWI9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-11A0A0A6YWI9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-11A0A0A6YWI9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-11A0A0A6YWI9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-11A0A0A6YWI9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-11A0A0A6YWI9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ighv1-11A0A0A6YWI9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-11A0A0A6YWI9 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.17■□□□□ 0.5
Ighv1-11A0A0A6YWI9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-11A0A0A6YWI9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ighv1-11A0A0A6YWI9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-11A0A0A6YWI9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-11A0A0A6YWI9 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.15■□□□□ 0.5
Ighv1-11A0A0A6YWI9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-11A0A0A6YWI9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-11A0A0A6YWI9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-11A0A0A6YWI9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ighv1-11A0A0A6YWI9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ighv1-11A0A0A6YWI9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-11A0A0A6YWI9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-11A0A0A6YWI9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.12■□□□□ 0.49
Ighv1-11A0A0A6YWI9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.11■□□□□ 0.49
Ighv1-11A0A0A6YWI9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ighv1-11A0A0A6YWI9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ighv1-11A0A0A6YWI9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-11A0A0A6YWI9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ighv1-11A0A0A6YWI9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.07■□□□□ 0.48
Ighv1-11A0A0A6YWI9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-11A0A0A6YWI9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-11A0A0A6YWI9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-11A0A0A6YWI9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-11A0A0A6YWI9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-11A0A0A6YWI9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ighv1-11A0A0A6YWI9 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.05■□□□□ 0.48
Ighv1-11A0A0A6YWI9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-11A0A0A6YWI9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-11A0A0A6YWI9 Mipep-204ENSMUST00000225043 1548 ntBASIC18.03■□□□□ 0.48
Ighv1-11A0A0A6YWI9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-11A0A0A6YWI9 Zxda-201ENSMUST00000117281 2621 ntBASIC18.02■□□□□ 0.48
Ighv1-11A0A0A6YWI9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ighv1-11A0A0A6YWI9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-11A0A0A6YWI9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-11A0A0A6YWI9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-11A0A0A6YWI9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-11A0A0A6YWI9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-11A0A0A6YWI9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.99■□□□□ 0.47
Ighv1-11A0A0A6YWI9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-11A0A0A6YWI9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.98■□□□□ 0.47
Ighv1-11A0A0A6YWI9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-11A0A0A6YWI9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-11A0A0A6YWI9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-11A0A0A6YWI9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ighv1-11A0A0A6YWI9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-11A0A0A6YWI9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ighv1-11A0A0A6YWI9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.97■□□□□ 0.47
Ighv1-11A0A0A6YWI9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.97■□□□□ 0.47
Ighv1-11A0A0A6YWI9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-11A0A0A6YWI9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Ighv1-11A0A0A6YWI9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-11A0A0A6YWI9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-11A0A0A6YWI9 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.94■□□□□ 0.46
Ighv1-11A0A0A6YWI9 Gm27322-201ENSMUST00000184007 104 ntBASIC17.94■□□□□ 0.46
Ighv1-11A0A0A6YWI9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-11A0A0A6YWI9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Ighv1-11A0A0A6YWI9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ighv1-11A0A0A6YWI9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-11A0A0A6YWI9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-11A0A0A6YWI9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-11A0A0A6YWI9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-11A0A0A6YWI9 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.91■□□□□ 0.46
Ighv1-11A0A0A6YWI9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-11A0A0A6YWI9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.9■□□□□ 0.46
Ighv1-11A0A0A6YWI9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-11A0A0A6YWI9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-11A0A0A6YWI9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
Ighv1-11A0A0A6YWI9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ighv1-11A0A0A6YWI9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-11A0A0A6YWI9 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.86■□□□□ 0.45
Ighv1-11A0A0A6YWI9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-11A0A0A6YWI9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-11A0A0A6YWI9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Ighv1-11A0A0A6YWI9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.84■□□□□ 0.45
Ighv1-11A0A0A6YWI9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-11A0A0A6YWI9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv1-11A0A0A6YWI9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-11A0A0A6YWI9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-11A0A0A6YWI9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
Ighv1-11A0A0A6YWI9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-11A0A0A6YWI9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-11A0A0A6YWI9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Ighv1-11A0A0A6YWI9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
Ighv1-11A0A0A6YWI9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-11A0A0A6YWI9 Gm26115-201ENSMUST00000175605 87 ntBASIC17.78■□□□□ 0.44
Ighv1-11A0A0A6YWI9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms