Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav7-6A0A075B640 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7-6A0A075B640 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-6A0A075B640 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7-6A0A075B640 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7-6A0A075B640 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.93■□□□□ 0.46
Trav7-6A0A075B640 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7-6A0A075B640 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7-6A0A075B640 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trav7-6A0A075B640 Gm25262-201ENSMUST00000174934 133 ntBASIC17.92■□□□□ 0.46
Trav7-6A0A075B640 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.9■□□□□ 0.46
Trav7-6A0A075B640 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.9■□□□□ 0.46
Trav7-6A0A075B640 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav7-6A0A075B640 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav7-6A0A075B640 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7-6A0A075B640 AL845457.1-201ENSMUST00000197244 68 ntBASIC17.87■□□□□ 0.45
Trav7-6A0A075B640 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav7-6A0A075B640 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trav7-6A0A075B640 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav7-6A0A075B640 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav7-6A0A075B640 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7-6A0A075B640 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7-6A0A075B640 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7-6A0A075B640 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav7-6A0A075B640 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7-6A0A075B640 Mipep-204ENSMUST00000225043 1548 ntBASIC17.8■□□□□ 0.44
Trav7-6A0A075B640 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trav7-6A0A075B640 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7-6A0A075B640 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7-6A0A075B640 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7-6A0A075B640 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7-6A0A075B640 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav7-6A0A075B640 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7-6A0A075B640 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7-6A0A075B640 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7-6A0A075B640 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trav7-6A0A075B640 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Trav7-6A0A075B640 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7-6A0A075B640 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7-6A0A075B640 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC17.71■□□□□ 0.43
Trav7-6A0A075B640 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav7-6A0A075B640 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7-6A0A075B640 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7-6A0A075B640 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7-6A0A075B640 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7-6A0A075B640 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7-6A0A075B640 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-6A0A075B640 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.67■□□□□ 0.42
Trav7-6A0A075B640 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-6A0A075B640 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav7-6A0A075B640 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7-6A0A075B640 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7-6A0A075B640 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav7-6A0A075B640 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7-6A0A075B640 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.64■□□□□ 0.42
Trav7-6A0A075B640 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7-6A0A075B640 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7-6A0A075B640 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7-6A0A075B640 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7-6A0A075B640 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7-6A0A075B640 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7-6A0A075B640 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trav7-6A0A075B640 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.6■□□□□ 0.41
Trav7-6A0A075B640 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7-6A0A075B640 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7-6A0A075B640 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7-6A0A075B640 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trav7-6A0A075B640 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.58■□□□□ 0.4
Trav7-6A0A075B640 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav7-6A0A075B640 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7-6A0A075B640 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7-6A0A075B640 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7-6A0A075B640 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7-6A0A075B640 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav7-6A0A075B640 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.55■□□□□ 0.4
Trav7-6A0A075B640 Gm27322-201ENSMUST00000184007 104 ntBASIC17.54■□□□□ 0.4
Trav7-6A0A075B640 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7-6A0A075B640 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trav7-6A0A075B640 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-6A0A075B640 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-6A0A075B640 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-6A0A075B640 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.52■□□□□ 0.4
Trav7-6A0A075B640 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.51■□□□□ 0.39
Trav7-6A0A075B640 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.51■□□□□ 0.39
Trav7-6A0A075B640 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.5■□□□□ 0.39
Trav7-6A0A075B640 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7-6A0A075B640 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Trav7-6A0A075B640 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav7-6A0A075B640 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav7-6A0A075B640 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7-6A0A075B640 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7-6A0A075B640 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Trav7-6A0A075B640 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7-6A0A075B640 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.47■□□□□ 0.39
Trav7-6A0A075B640 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-6A0A075B640 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-6A0A075B640 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-6A0A075B640 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Trav7-6A0A075B640 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav7-6A0A075B640 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms