Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 ACTBP11-201ENST00000436287 1126 ntBASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 RN7SL774P-201ENST00000577467 290 ntBASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RSPO3Q9BXY4 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 AL133338.1-201ENST00000565695 1517 ntBASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 KRT8P31-201ENST00000504812 1408 ntBASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 AL645937.6-201ENST00000641122 3727 ntBASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 AC006033.1-201ENST00000440505 426 ntBASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 RPSAP15-201ENST00000448168 861 ntBASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 RN7SL788P-201ENST00000460504 316 ntBASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 AL109837.1-201ENST00000603272 613 ntBASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 IL9RP3-201ENST00000442856 1674 ntBASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 AC104590.1-202ENST00000558368 1921 ntBASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms