Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH3Q96II8 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH3Q96II8 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRCH3Q96II8 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH3Q96II8 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH3Q96II8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH3Q96II8 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.07■□□□□ 0
LRCH3Q96II8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH3Q96II8 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH3Q96II8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
LRCH3Q96II8 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH3Q96II8 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH3Q96II8 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LRCH3Q96II8 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
LRCH3Q96II8 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
LRCH3Q96II8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LRCH3Q96II8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LRCH3Q96II8 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 RPS20P25-201ENST00000412447 352 ntBASIC15.06■□□□□ 0
LRCH3Q96II8 BX679664.3-201ENST00000414070 555 ntBASIC15.06■□□□□ 0
LRCH3Q96II8 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC15.06■□□□□ 0
LRCH3Q96II8 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.06■□□□□ 0
LRCH3Q96II8 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC15.06■□□□□ 0
LRCH3Q96II8 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC15.06■□□□□ 0
LRCH3Q96II8 AC113935.1-201ENST00000471722 555 ntBASIC15.06■□□□□ 0
LRCH3Q96II8 RPL29P2-201ENST00000488409 460 ntBASIC15.06■□□□□ 0
LRCH3Q96II8 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.06■□□□□ 0
LRCH3Q96II8 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC15.06■□□□□ 0
LRCH3Q96II8 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC15.06■□□□□ 0
LRCH3Q96II8 CETN3-205ENST00000522842 664 ntTSL 2 BASIC15.06■□□□□ 0
LRCH3Q96II8 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC15.06■□□□□ 0
LRCH3Q96II8 KRT127P-201ENST00000547183 433 ntBASIC15.06■□□□□ 0
LRCH3Q96II8 AL139317.2-201ENST00000556998 158 ntBASIC15.06■□□□□ 0
LRCH3Q96II8 MIR4459-201ENST00000581837 66 ntBASIC15.06■□□□□ 0
LRCH3Q96II8 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC15.06■□□□□ 0
LRCH3Q96II8 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC15.06■□□□□ 0
LRCH3Q96II8 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LRCH3Q96II8 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.06■□□□□ 0
LRCH3Q96II8 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LRCH3Q96II8 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.06■□□□□ 0
LRCH3Q96II8 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.06■□□□□ 0
LRCH3Q96II8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LRCH3Q96II8 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCH3Q96II8 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LRCH3Q96II8 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
LRCH3Q96II8 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LRCH3Q96II8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.05■□□□□ 0
LRCH3Q96II8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.05■□□□□ 0
LRCH3Q96II8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LRCH3Q96II8 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
LRCH3Q96II8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.05■□□□□ 0
LRCH3Q96II8 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRCH3Q96II8 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC15.05■□□□□ -0
LRCH3Q96II8 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRCH3Q96II8 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRCH3Q96II8 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC15.05■□□□□ -0
LRCH3Q96II8 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC15.05■□□□□ -0
LRCH3Q96II8 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRCH3Q96II8 AC092810.2-201ENST00000431570 362 ntBASIC15.05■□□□□ -0
LRCH3Q96II8 AC092865.2-201ENST00000439409 971 ntBASIC15.05■□□□□ -0
LRCH3Q96II8 RN7SL794P-201ENST00000469816 280 ntBASIC15.05■□□□□ -0
LRCH3Q96II8 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
LRCH3Q96II8 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LRCH3Q96II8 AC010202.1-201ENST00000551181 405 ntBASIC15.05■□□□□ -0
LRCH3Q96II8 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC15.05■□□□□ -0
LRCH3Q96II8 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC15.05■□□□□ -0
LRCH3Q96II8 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC15.05■□□□□ -0
LRCH3Q96II8 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC15.05■□□□□ -0
LRCH3Q96II8 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LRCH3Q96II8 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRCH3Q96II8 AC069061.4-201ENST00000581294 1347 ntBASIC15.05■□□□□ -0
LRCH3Q96II8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.05■□□□□ -0
LRCH3Q96II8 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.05■□□□□ -0
LRCH3Q96II8 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.05■□□□□ -0
LRCH3Q96II8 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms