Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 RPL18AP8-201ENST00000486071 528 ntBASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 HIST2H2BC-201ENST00000498492 580 ntBASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 AC024681.1-201ENST00000521917 487 ntBASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 AC145285.5-201ENST00000562217 361 ntBASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 MIR4754-201ENST00000582477 89 ntBASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 AL049840.2-201ENST00000602722 535 ntBASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.6□□□□□ -0.23
PDLIM5Q96HC4 DLX4-206ENST00000611342 1662 ntBASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 AC020907.1-201ENST00000616460 1350 ntBASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 MIR557-201ENST00000385239 98 ntBASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 AL627231.1-201ENST00000394467 1125 ntBASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 EEF1DP2-201ENST00000433698 843 ntBASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 MIR4265-201ENST00000582152 99 ntBASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 HPX-213ENST00000615166 826 ntTSL 5 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 AC126335.2-201ENST00000623362 4637 ntBASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
PDLIM5Q96HC4 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PDLIM5Q96HC4 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
PDLIM5Q96HC4 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PDLIM5Q96HC4 FAM90A2P-201ENST00000511144 1395 ntBASIC13.58□□□□□ -0.23
PDLIM5Q96HC4 FAM90A25P-201ENST00000528404 1395 ntBASIC13.58□□□□□ -0.23
PDLIM5Q96HC4 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
PDLIM5Q96HC4 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms