Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-CQ95604 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-CQ95604 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-CQ95604 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HLA-CQ95604 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-CQ95604 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-CQ95604 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
HLA-CQ95604 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-CQ95604 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-CQ95604 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-CQ95604 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HLA-CQ95604 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-CQ95604 RBMXP1-201ENST00000408004 1191 ntBASIC14.2□□□□□ -0.14
HLA-CQ95604 AP001331.1-201ENST00000413008 1015 ntBASIC14.2□□□□□ -0.14
HLA-CQ95604 FTLP3-201ENST00000427242 528 ntBASIC14.2□□□□□ -0.14
HLA-CQ95604 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
HLA-CQ95604 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-CQ95604 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-CQ95604 CHCHD2P6-201ENST00000454346 447 ntBASIC14.2□□□□□ -0.14
HLA-CQ95604 RN7SL22P-201ENST00000471800 269 ntBASIC14.2□□□□□ -0.14
HLA-CQ95604 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
HLA-CQ95604 HNRNPA1P4-201ENST00000509706 756 ntBASIC14.2□□□□□ -0.14
HLA-CQ95604 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC14.2□□□□□ -0.14
HLA-CQ95604 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-CQ95604 AP001102.1-201ENST00000528959 409 ntBASIC14.2□□□□□ -0.14
HLA-CQ95604 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC14.2□□□□□ -0.14
HLA-CQ95604 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC14.2□□□□□ -0.14
HLA-CQ95604 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC14.2□□□□□ -0.14
HLA-CQ95604 FAM223B-202ENST00000598177 713 ntBASIC14.2□□□□□ -0.14
HLA-CQ95604 AC015849.4-201ENST00000603678 421 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-CQ95604 AC127002.1-201ENST00000619123 455 ntBASIC14.2□□□□□ -0.14
HLA-CQ95604 AC005785.2-201ENST00000624655 631 ntBASIC14.2□□□□□ -0.14
HLA-CQ95604 FAM223A-202ENST00000625204 713 ntBASIC14.2□□□□□ -0.14
HLA-CQ95604 SNORA50D-202ENST00000627561 132 ntBASIC14.2□□□□□ -0.14
HLA-CQ95604 AL139424.3-202ENST00000641619 917 ntBASIC14.2□□□□□ -0.14
HLA-CQ95604 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-CQ95604 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-CQ95604 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC14.2□□□□□ -0.14
HLA-CQ95604 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-CQ95604 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HLA-CQ95604 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-CQ95604 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-CQ95604 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-CQ95604 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
HLA-CQ95604 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HLA-CQ95604 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 AC124944.3-201ENST00000607976 1304 ntBASIC14.19□□□□□ -0.14
HLA-CQ95604 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 DBET-201ENST00000630918 3363 ntBASIC14.19□□□□□ -0.14
HLA-CQ95604 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-CQ95604 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
HLA-CQ95604 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 AL022313.4-201ENST00000562756 2046 ntBASIC14.19□□□□□ -0.14
HLA-CQ95604 AC011498.7-201ENST00000624986 2027 ntBASIC14.19□□□□□ -0.14
HLA-CQ95604 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC14.19□□□□□ -0.14
HLA-CQ95604 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HLA-CQ95604 SNORA50D-201ENST00000408059 134 ntBASIC14.19□□□□□ -0.14
HLA-CQ95604 AL049792.1-201ENST00000424708 1262 ntBASIC14.19□□□□□ -0.14
HLA-CQ95604 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HLA-CQ95604 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC14.19□□□□□ -0.14
HLA-CQ95604 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC14.19□□□□□ -0.14
HLA-CQ95604 RPL13AP5-201ENST00000439189 612 ntBASIC14.19□□□□□ -0.14
HLA-CQ95604 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC14.19□□□□□ -0.14
HLA-CQ95604 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HLA-CQ95604 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 RN7SL479P-201ENST00000472003 300 ntBASIC14.19□□□□□ -0.14
HLA-CQ95604 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC14.19□□□□□ -0.14
HLA-CQ95604 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC14.19□□□□□ -0.14
HLA-CQ95604 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-CQ95604 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC14.19□□□□□ -0.14
HLA-CQ95604 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-CQ95604 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC14.19□□□□□ -0.14
HLA-CQ95604 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
HLA-CQ95604 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC14.19□□□□□ -0.14
HLA-CQ95604 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC14.19□□□□□ -0.14
HLA-CQ95604 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
HLA-CQ95604 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC14.19□□□□□ -0.14
HLA-CQ95604 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 AC136475.9-201ENST00000605240 497 ntBASIC14.19□□□□□ -0.14
HLA-CQ95604 AC073592.10-201ENST00000624789 597 ntBASIC14.19□□□□□ -0.14
HLA-CQ95604 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HLA-CQ95604 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 AC018529.2-202ENST00000611482 3087 ntBASIC14.19□□□□□ -0.14
HLA-CQ95604 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC14.19□□□□□ -0.14
HLA-CQ95604 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-CQ95604 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms