Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 FAM21FP-201ENST00000426241 1131 ntBASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 CNN2P10-201ENST00000443067 918 ntBASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 PUDPP3-201ENST00000445368 636 ntBASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 AC022210.1-201ENST00000449856 793 ntBASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 SNX29P1-201ENST00000548357 1007 ntBASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 COX11-210ENST00000639671 696 ntBASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 AC125807.2-201ENST00000513358 3514 ntBASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 MAX-212ENST00000555932 1673 ntTSL 5 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 IKZF4-203ENST00000547167 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 AC005696.4-201ENST00000614400 3147 ntBASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 GK-202ENST00000378941 458 ntTSL 3 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 HLA-V-201ENST00000429037 534 ntBASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 CSF2RBP1-201ENST00000447905 391 ntBASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 C2orf69P2-201ENST00000562032 1123 ntBASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 MIR4683-201ENST00000579659 81 ntBASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 AC008825.2-201ENST00000603374 718 ntBASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 AL136301.1-201ENST00000615830 422 ntBASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 AC015688.4-201ENST00000580780 1647 ntBASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM53Q6P2H8 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms