Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 RN7SKP175-201ENST00000408472 289 ntBASIC13.18□□□□□ -0.3
LPCAT4Q643R3 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.18□□□□□ -0.3
LPCAT4Q643R3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 PKP4P1-201ENST00000426801 2158 ntBASIC13.18□□□□□ -0.3
LPCAT4Q643R3 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 POM121L7P-201ENST00000329949 2404 ntBASIC13.17□□□□□ -0.3
LPCAT4Q643R3 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 AC245100.3-201ENST00000441281 285 ntBASIC13.17□□□□□ -0.3
LPCAT4Q643R3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 AC125807.1-201ENST00000483097 614 ntBASIC13.17□□□□□ -0.3
LPCAT4Q643R3 AC069120.2-201ENST00000524091 540 ntBASIC13.17□□□□□ -0.3
LPCAT4Q643R3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC13.17□□□□□ -0.3
LPCAT4Q643R3 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 AC007952.5-201ENST00000572818 1486 ntBASIC13.16□□□□□ -0.3
LPCAT4Q643R3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 IL9RP3-201ENST00000442856 1674 ntBASIC13.16□□□□□ -0.3
LPCAT4Q643R3 CCT8L1P-201ENST00000465400 1674 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms