Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 ARHGAP23P1-201ENST00000562773 1937 ntBASIC18.78■□□□□ 0.6
CGNL1Q0VF96 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CGNL1Q0VF96 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 AC234644.1-201ENST00000406065 370 ntBASIC18.77■□□□□ 0.6
CGNL1Q0VF96 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 HCG27-204ENST00000424675 895 ntTSL 3 BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CGNL1Q0VF96 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CGNL1Q0VF96 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CGNL1Q0VF96 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC18.77■□□□□ 0.59
CGNL1Q0VF96 AL672207.1-201ENST00000328462 1570 ntBASIC18.77■□□□□ 0.59
CGNL1Q0VF96 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC18.77■□□□□ 0.59
CGNL1Q0VF96 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CGNL1Q0VF96 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 FAM90A21P-201ENST00000510875 1396 ntBASIC18.76■□□□□ 0.59
CGNL1Q0VF96 FAM90A15P-201ENST00000514465 1395 ntBASIC18.76■□□□□ 0.59
CGNL1Q0VF96 FAM90A6P-201ENST00000515148 1394 ntBASIC18.76■□□□□ 0.59
CGNL1Q0VF96 FAM90A16P-201ENST00000526662 1395 ntBASIC18.76■□□□□ 0.59
CGNL1Q0VF96 FAM90A9P-201ENST00000527940 1395 ntBASIC18.76■□□□□ 0.59
CGNL1Q0VF96 FAM90A5P-201ENST00000528738 1395 ntBASIC18.76■□□□□ 0.59
CGNL1Q0VF96 FAM90A14P-201ENST00000530386 1395 ntBASIC18.76■□□□□ 0.59
CGNL1Q0VF96 FAM90A13P-201ENST00000534703 1395 ntBASIC18.76■□□□□ 0.59
CGNL1Q0VF96 AC072061.1-201ENST00000569710 2234 ntBASIC18.76■□□□□ 0.59
CGNL1Q0VF96 AC010327.5-201ENST00000586923 3061 ntBASIC18.76■□□□□ 0.59
CGNL1Q0VF96 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 PSAT1P2-201ENST00000426107 972 ntBASIC18.76■□□□□ 0.59
CGNL1Q0VF96 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 MIR6746-201ENST00000620971 63 ntBASIC18.76■□□□□ 0.59
CGNL1Q0VF96 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CGNL1Q0VF96 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms