Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC14.97□□□□□ -0.01
BRCA2P51587 KRT18P15-201ENST00000458108 1291 ntBASIC14.97□□□□□ -0.01
BRCA2P51587 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.97□□□□□ -0.01
BRCA2P51587 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC14.97□□□□□ -0.01
BRCA2P51587 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC14.97□□□□□ -0.01
BRCA2P51587 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRCA2P51587 M1AP-201ENST00000290536 2543 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BRCA2P51587 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRCA2P51587 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
BRCA2P51587 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRCA2P51587 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BRCA2P51587 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRCA2P51587 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRCA2P51587 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
BRCA2P51587 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRCA2P51587 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
BRCA2P51587 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC14.97□□□□□ -0.01
BRCA2P51587 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC14.97□□□□□ -0.01
BRCA2P51587 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC14.97□□□□□ -0.01
BRCA2P51587 AC245884.8-201ENST00000599382 880 ntBASIC14.97□□□□□ -0.01
BRCA2P51587 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRCA2P51587 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRCA2P51587 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
BRCA2P51587 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRCA2P51587 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRCA2P51587 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
BRCA2P51587 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRCA2P51587 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.97□□□□□ -0.01
BRCA2P51587 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC14.97□□□□□ -0.01
BRCA2P51587 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BRCA2P51587 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRCA2P51587 AQP7-207ENST00000447660 998 ntTSL 2 BASIC14.97□□□□□ -0.01
BRCA2P51587 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC14.97□□□□□ -0.01
BRCA2P51587 AC010442.2-201ENST00000509301 407 ntBASIC14.97□□□□□ -0.01
BRCA2P51587 GH2-205ENST00000622506 702 ntTSL 5 BASIC14.97□□□□□ -0.01
BRCA2P51587 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRCA2P51587 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRCA2P51587 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BRCA2P51587 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRCA2P51587 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRCA2P51587 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.96□□□□□ -0.01
BRCA2P51587 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRCA2P51587 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
BRCA2P51587 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC14.96□□□□□ -0.01
BRCA2P51587 AP000343.1-201ENST00000440602 385 ntBASIC14.96□□□□□ -0.01
BRCA2P51587 AC007690.1-201ENST00000451924 468 ntBASIC14.96□□□□□ -0.01
BRCA2P51587 CNN2P1-201ENST00000453616 918 ntBASIC14.96□□□□□ -0.01
BRCA2P51587 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC14.96□□□□□ -0.01
BRCA2P51587 TPI1P2-201ENST00000491343 752 ntBASIC14.96□□□□□ -0.01
BRCA2P51587 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC14.96□□□□□ -0.01
BRCA2P51587 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRCA2P51587 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRCA2P51587 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
BRCA2P51587 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
BRCA2P51587 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BRCA2P51587 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRCA2P51587 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BRCA2P51587 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BRCA2P51587 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BRCA2P51587 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
BRCA2P51587 AC091905.3-201ENST00000624959 234 ntBASIC14.96□□□□□ -0.01
BRCA2P51587 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
BRCA2P51587 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
BRCA2P51587 DNAJB8-202ENST00000469083 3365 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
BRCA2P51587 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.96□□□□□ -0.02
BRCA2P51587 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
BRCA2P51587 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
BRCA2P51587 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
BRCA2P51587 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
BRCA2P51587 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
BRCA2P51587 AC018445.4-201ENST00000624066 2291 ntBASIC14.95□□□□□ -0.02
BRCA2P51587 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC14.95□□□□□ -0.02
BRCA2P51587 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC14.95□□□□□ -0.02
BRCA2P51587 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC14.95□□□□□ -0.02
BRCA2P51587 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC14.95□□□□□ -0.02
BRCA2P51587 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC14.95□□□□□ -0.02
BRCA2P51587 AP001505.1-201ENST00000569966 824 ntBASIC14.95□□□□□ -0.02
BRCA2P51587 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC14.95□□□□□ -0.02
BRCA2P51587 AC024075.2-201ENST00000598112 1473 ntBASIC14.95□□□□□ -0.02
BRCA2P51587 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
BRCA2P51587 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC14.95□□□□□ -0.02
BRCA2P51587 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC14.95□□□□□ -0.02
BRCA2P51587 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.95□□□□□ -0.02
BRCA2P51587 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
BRCA2P51587 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRCA2P51587 AK2-208ENST00000487289 920 ntTSL 2 BASIC14.95□□□□□ -0.02
BRCA2P51587 MIR2277-201ENST00000515916 93 ntBASIC14.95□□□□□ -0.02
BRCA2P51587 AC005336.1-201ENST00000585431 1243 ntBASIC14.95□□□□□ -0.02
BRCA2P51587 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
BRCA2P51587 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC14.95□□□□□ -0.02
BRCA2P51587 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRCA2P51587 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRCA2P51587 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRCA2P51587 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRCA2P51587 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.95□□□□□ -0.02
BRCA2P51587 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.95□□□□□ -0.02
BRCA2P51587 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BRCA2P51587 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BRCA2P51587 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BRCA2P51587 TUBAP-201ENST00000425085 1352 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms