Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CTLA4P16410 AC020763.3-201ENST00000625095 2904 ntBASIC12.41□□□□□ -0.42
CTLA4P16410 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CTLA4P16410 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.41□□□□□ -0.42
CTLA4P16410 KRT8P43-201ENST00000406052 1458 ntBASIC12.41□□□□□ -0.42
CTLA4P16410 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.41□□□□□ -0.42
CTLA4P16410 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.41□□□□□ -0.42
CTLA4P16410 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.41□□□□□ -0.42
CTLA4P16410 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.41□□□□□ -0.42
CTLA4P16410 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.41□□□□□ -0.42
CTLA4P16410 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.41□□□□□ -0.42
CTLA4P16410 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
CTLA4P16410 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CTLA4P16410 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CTLA4P16410 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.41□□□□□ -0.42
CTLA4P16410 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.41□□□□□ -0.42
CTLA4P16410 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.41□□□□□ -0.42
CTLA4P16410 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.41□□□□□ -0.42
CTLA4P16410 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.41□□□□□ -0.42
CTLA4P16410 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.41□□□□□ -0.42
CTLA4P16410 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.41□□□□□ -0.42
CTLA4P16410 SLC25A15P3-201ENST00000505530 290 ntBASIC12.41□□□□□ -0.42
CTLA4P16410 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.41□□□□□ -0.42
CTLA4P16410 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.41□□□□□ -0.42
CTLA4P16410 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.41□□□□□ -0.42
CTLA4P16410 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.41□□□□□ -0.42
CTLA4P16410 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.41□□□□□ -0.42
CTLA4P16410 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.41□□□□□ -0.42
CTLA4P16410 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.41□□□□□ -0.42
CTLA4P16410 AL359881.2-201ENST00000602973 570 ntBASIC12.41□□□□□ -0.42
CTLA4P16410 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 AL645939.5-201ENST00000606834 243 ntBASIC12.41□□□□□ -0.42
CTLA4P16410 AL021707.6-201ENST00000609212 491 ntBASIC12.41□□□□□ -0.42
CTLA4P16410 AC138649.2-201ENST00000615886 705 ntBASIC12.41□□□□□ -0.42
CTLA4P16410 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 AL805961.1-203ENST00000641078 1258 ntBASIC12.41□□□□□ -0.42
CTLA4P16410 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.41□□□□□ -0.42
CTLA4P16410 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.41□□□□□ -0.42
CTLA4P16410 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CTLA4P16410 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.41□□□□□ -0.42
CTLA4P16410 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.41□□□□□ -0.42
CTLA4P16410 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CTLA4P16410 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.41□□□□□ -0.42
CTLA4P16410 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.41□□□□□ -0.42
CTLA4P16410 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTLA4P16410 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.41□□□□□ -0.42
CTLA4P16410 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CTLA4P16410 AC004554.1-201ENST00000422830 1468 ntBASIC12.4□□□□□ -0.42
CTLA4P16410 AC073862.5-201ENST00000624129 2027 ntBASIC12.4□□□□□ -0.42
CTLA4P16410 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CTLA4P16410 FRMPD2B-201ENST00000431305 1347 ntBASIC12.4□□□□□ -0.42
CTLA4P16410 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CTLA4P16410 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CTLA4P16410 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.4□□□□□ -0.42
CTLA4P16410 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CTLA4P16410 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.4□□□□□ -0.42
CTLA4P16410 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CTLA4P16410 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
CTLA4P16410 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CTLA4P16410 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.4□□□□□ -0.42
CTLA4P16410 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
CTLA4P16410 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CTLA4P16410 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.4□□□□□ -0.42
CTLA4P16410 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CTLA4P16410 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CTLA4P16410 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.4□□□□□ -0.42
CTLA4P16410 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CTLA4P16410 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CTLA4P16410 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CTLA4P16410 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CTLA4P16410 KRT17P5-201ENST00000332088 839 ntBASIC12.4□□□□□ -0.42
CTLA4P16410 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms