Protein–RNA interactions for Protein: P11686

SFTPC, Pulmonary surfactant-associated protein C, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPCP11686 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPCP11686 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.71□□□□□ -0.37
SFTPCP11686 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC12.71□□□□□ -0.37
SFTPCP11686 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPCP11686 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPCP11686 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SFTPCP11686 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.71□□□□□ -0.37
SFTPCP11686 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPCP11686 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
SFTPCP11686 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SFTPCP11686 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPCP11686 AC112693.3-201ENST00000624819 1983 ntBASIC12.71□□□□□ -0.37
SFTPCP11686 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPCP11686 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
SFTPCP11686 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPCP11686 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPCP11686 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPCP11686 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPCP11686 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPCP11686 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC12.71□□□□□ -0.37
SFTPCP11686 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC12.71□□□□□ -0.37
SFTPCP11686 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.71□□□□□ -0.37
SFTPCP11686 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPCP11686 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC12.71□□□□□ -0.37
SFTPCP11686 INO80E-209ENST00000567254 625 ntTSL 2 BASIC12.71□□□□□ -0.37
SFTPCP11686 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC12.71□□□□□ -0.37
SFTPCP11686 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.71□□□□□ -0.37
SFTPCP11686 AL049840.2-201ENST00000602722 535 ntBASIC12.71□□□□□ -0.37
SFTPCP11686 OR3A1-202ENST00000615105 966 ntBASIC12.71□□□□□ -0.37
SFTPCP11686 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPCP11686 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPCP11686 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SFTPCP11686 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SFTPCP11686 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SFTPCP11686 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.71□□□□□ -0.37
SFTPCP11686 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SFTPCP11686 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.71□□□□□ -0.37
SFTPCP11686 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPCP11686 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SFTPCP11686 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
SFTPCP11686 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.71□□□□□ -0.38
SFTPCP11686 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPCP11686 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPCP11686 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPCP11686 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPCP11686 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPCP11686 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPCP11686 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPCP11686 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPCP11686 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.71□□□□□ -0.38
SFTPCP11686 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.71□□□□□ -0.38
SFTPCP11686 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
SFTPCP11686 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
SFTPCP11686 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SFTPCP11686 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPCP11686 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC12.7□□□□□ -0.38
SFTPCP11686 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SFTPCP11686 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPCP11686 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPCP11686 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPCP11686 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SFTPCP11686 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.7□□□□□ -0.38
SFTPCP11686 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPCP11686 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SFTPCP11686 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPCP11686 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPCP11686 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SFTPCP11686 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPCP11686 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.7□□□□□ -0.38
SFTPCP11686 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.7□□□□□ -0.38
SFTPCP11686 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPCP11686 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPCP11686 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC12.7□□□□□ -0.38
SFTPCP11686 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPCP11686 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPCP11686 KRT18P44-201ENST00000416086 1285 ntBASIC12.7□□□□□ -0.38
SFTPCP11686 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC12.7□□□□□ -0.38
SFTPCP11686 AC103563.1-201ENST00000429316 123 ntBASIC12.7□□□□□ -0.38
SFTPCP11686 HLA-W-207ENST00000439514 771 ntBASIC12.7□□□□□ -0.38
SFTPCP11686 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.7□□□□□ -0.38
SFTPCP11686 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC12.7□□□□□ -0.38
SFTPCP11686 GULOP-201ENST00000454030 748 ntBASIC12.7□□□□□ -0.38
SFTPCP11686 AC104212.2-201ENST00000478813 628 ntBASIC12.7□□□□□ -0.38
SFTPCP11686 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC12.7□□□□□ -0.38
SFTPCP11686 AC011431.1-201ENST00000512971 230 ntBASIC12.7□□□□□ -0.38
SFTPCP11686 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SFTPCP11686 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.7□□□□□ -0.38
SFTPCP11686 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPCP11686 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC12.7□□□□□ -0.38
SFTPCP11686 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC12.7□□□□□ -0.38
SFTPCP11686 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC12.7□□□□□ -0.38
SFTPCP11686 ABCC6P1-203ENST00000565566 1170 ntBASIC12.7□□□□□ -0.38
SFTPCP11686 KRT8P34-201ENST00000577607 1044 ntBASIC12.7□□□□□ -0.38
SFTPCP11686 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC12.7□□□□□ -0.38
SFTPCP11686 AC126755.5-201ENST00000622756 267 ntBASIC12.7□□□□□ -0.38
SFTPCP11686 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SFTPCP11686 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.7□□□□□ -0.38
SFTPCP11686 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SFTPCP11686 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SFTPCP11686 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms