Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC14.59□□□□□ -0.07
RB1P06400 AC010900.1-201ENST00000449849 1296 ntBASIC14.59□□□□□ -0.07
RB1P06400 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC14.59□□□□□ -0.07
RB1P06400 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC14.59□□□□□ -0.07
RB1P06400 LY6E-215ENST00000523847 427 ntTSL 3 BASIC14.59□□□□□ -0.07
RB1P06400 OR4A49P-201ENST00000527050 632 ntBASIC14.59□□□□□ -0.07
RB1P06400 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC14.59□□□□□ -0.07
RB1P06400 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC14.59□□□□□ -0.07
RB1P06400 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
RB1P06400 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC14.59□□□□□ -0.07
RB1P06400 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC14.59□□□□□ -0.07
RB1P06400 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC14.59□□□□□ -0.07
RB1P06400 AC123912.6-201ENST00000612657 315 ntBASIC14.59□□□□□ -0.07
RB1P06400 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RB1P06400 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC14.59□□□□□ -0.07
RB1P06400 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC14.59□□□□□ -0.07
RB1P06400 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC14.59□□□□□ -0.07
RB1P06400 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.59□□□□□ -0.07
RB1P06400 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.59□□□□□ -0.07
RB1P06400 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 AC097376.2-205ENST00000610159 5334 ntBASIC14.59□□□□□ -0.07
RB1P06400 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC14.59□□□□□ -0.07
RB1P06400 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
RB1P06400 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.59□□□□□ -0.07
RB1P06400 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.58□□□□□ -0.07
RB1P06400 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RB1P06400 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.07
RB1P06400 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RB1P06400 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RB1P06400 AL121753.2-201ENST00000624581 1461 ntBASIC14.58□□□□□ -0.08
RB1P06400 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.58□□□□□ -0.08
RB1P06400 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RB1P06400 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RB1P06400 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.58□□□□□ -0.08
RB1P06400 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RB1P06400 HSPA8P5-201ENST00000456928 2069 ntBASIC14.58□□□□□ -0.08
RB1P06400 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.58□□□□□ -0.08
RB1P06400 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RB1P06400 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RB1P06400 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.58□□□□□ -0.08
RB1P06400 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RB1P06400 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RB1P06400 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
RB1P06400 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC14.58□□□□□ -0.08
RB1P06400 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC14.58□□□□□ -0.08
RB1P06400 DPY19L2P4-201ENST00000479881 442 ntBASIC14.58□□□□□ -0.08
RB1P06400 AC092910.2-201ENST00000491262 348 ntBASIC14.58□□□□□ -0.08
RB1P06400 MARK2P17-201ENST00000498560 841 ntBASIC14.58□□□□□ -0.08
RB1P06400 ISL1-203ENST00000511384 981 ntTSL 5 BASIC14.58□□□□□ -0.08
RB1P06400 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC14.58□□□□□ -0.08
RB1P06400 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RB1P06400 INO80E-209ENST00000567254 625 ntTSL 2 BASIC14.58□□□□□ -0.08
RB1P06400 AC133555.4-201ENST00000569081 152 ntBASIC14.58□□□□□ -0.08
RB1P06400 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC14.58□□□□□ -0.08
RB1P06400 RN7SL134P-201ENST00000579756 303 ntBASIC14.58□□□□□ -0.08
RB1P06400 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC14.58□□□□□ -0.08
RB1P06400 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RB1P06400 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC14.58□□□□□ -0.08
RB1P06400 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.58□□□□□ -0.08
RB1P06400 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RB1P06400 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RB1P06400 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RB1P06400 AC092053.3-201ENST00000641308 4975 ntBASIC14.58□□□□□ -0.08
RB1P06400 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RB1P06400 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RB1P06400 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.58□□□□□ -0.08
RB1P06400 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RB1P06400 HLF-202ENST00000430986 1385 ntTSL 2 BASIC14.58□□□□□ -0.08
RB1P06400 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RB1P06400 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC14.58□□□□□ -0.08
RB1P06400 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RB1P06400 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RB1P06400 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RB1P06400 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RB1P06400 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC14.57□□□□□ -0.08
RB1P06400 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC14.57□□□□□ -0.08
RB1P06400 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 AF013593.1-201ENST00000458074 1487 ntBASIC14.57□□□□□ -0.08
RB1P06400 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC14.57□□□□□ -0.08
RB1P06400 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC14.57□□□□□ -0.08
RB1P06400 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms