Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 SIGLEC22P-201ENST00000599104 714 ntBASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 AC087045.2-201ENST00000606279 1003 ntBASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 AC084781.1-201ENST00000613737 656 ntBASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 AP001184.1-201ENST00000637936 376 ntBASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 KC6-207ENST00000600644 2311 ntTSL 3 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 AC006372.4-201ENST00000624122 1543 ntBASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 MARK2P9-201ENST00000430958 1727 ntBASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
COL4A3BPQ9Y5P4 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 MPRIPP1-201ENST00000452433 1089 ntBASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 AC126335.2-201ENST00000623362 4637 ntBASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 AC131212.3-201ENST00000624087 4219 ntBASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 AL365181.3-201ENST00000605886 3222 ntBASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL4A3BPQ9Y5P4 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
COL4A3BPQ9Y5P4 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms