Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
IFT52Q9Y366 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.19□□□□□ -0.3
IFT52Q9Y366 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFT52Q9Y366 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
IFT52Q9Y366 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFT52Q9Y366 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.19□□□□□ -0.3
IFT52Q9Y366 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
IFT52Q9Y366 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.19□□□□□ -0.3
IFT52Q9Y366 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
IFT52Q9Y366 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFT52Q9Y366 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFT52Q9Y366 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC13.19□□□□□ -0.3
IFT52Q9Y366 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFT52Q9Y366 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFT52Q9Y366 AGAP12P-201ENST00000585227 2359 ntBASIC13.18□□□□□ -0.3
IFT52Q9Y366 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.18□□□□□ -0.3
IFT52Q9Y366 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.18□□□□□ -0.3
IFT52Q9Y366 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.18□□□□□ -0.3
IFT52Q9Y366 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.18□□□□□ -0.3
IFT52Q9Y366 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 AP000437.1-201ENST00000624057 2085 ntBASIC13.18□□□□□ -0.3
IFT52Q9Y366 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.18□□□□□ -0.3
IFT52Q9Y366 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 MIR1909-201ENST00000411312 80 ntBASIC13.18□□□□□ -0.3
IFT52Q9Y366 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 XBP1P1-201ENST00000436573 652 ntBASIC13.18□□□□□ -0.3
IFT52Q9Y366 ACA64.2-201ENST00000459014 129 ntBASIC13.18□□□□□ -0.3
IFT52Q9Y366 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.18□□□□□ -0.3
IFT52Q9Y366 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.18□□□□□ -0.3
IFT52Q9Y366 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.18□□□□□ -0.3
IFT52Q9Y366 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.18□□□□□ -0.3
IFT52Q9Y366 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.18□□□□□ -0.3
IFT52Q9Y366 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.18□□□□□ -0.3
IFT52Q9Y366 AP005482.1-201ENST00000563722 1273 ntBASIC13.18□□□□□ -0.3
IFT52Q9Y366 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
IFT52Q9Y366 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.18□□□□□ -0.3
IFT52Q9Y366 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
IFT52Q9Y366 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.18□□□□□ -0.3
IFT52Q9Y366 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
IFT52Q9Y366 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 KRT8P29-201ENST00000420409 1371 ntBASIC13.18□□□□□ -0.3
IFT52Q9Y366 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 AL357140.3-201ENST00000639753 1983 ntBASIC13.18□□□□□ -0.3
IFT52Q9Y366 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.18□□□□□ -0.3
IFT52Q9Y366 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
IFT52Q9Y366 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFT52Q9Y366 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.17□□□□□ -0.3
IFT52Q9Y366 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 AC079776.1-201ENST00000401540 1152 ntBASIC13.17□□□□□ -0.3
IFT52Q9Y366 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 POM121L10P-201ENST00000436994 1285 ntBASIC13.17□□□□□ -0.3
IFT52Q9Y366 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 OR2R1P-201ENST00000441404 914 ntBASIC13.17□□□□□ -0.3
IFT52Q9Y366 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 AC005324.6-201ENST00000587972 613 ntBASIC13.17□□□□□ -0.3
IFT52Q9Y366 AC008805.1-201ENST00000590892 364 ntBASIC13.17□□□□□ -0.3
IFT52Q9Y366 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms