Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.55□□□□□ -0.4
COPS3Q9UNS2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 AC026271.4-201ENST00000578214 1833 ntBASIC12.55□□□□□ -0.4
COPS3Q9UNS2 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 FMO6P-201ENST00000236166 1620 ntBASIC12.55□□□□□ -0.4
COPS3Q9UNS2 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AP003969.2-201ENST00000623739 2275 ntBASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AC026954.1-201ENST00000429771 1293 ntBASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 CROCCP4-201ENST00000457096 498 ntBASIC12.54□□□□□ -0.4
COPS3Q9UNS2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AP005018.1-201ENST00000525475 301 ntBASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AP000812.2-201ENST00000538934 718 ntBASIC12.54□□□□□ -0.4
COPS3Q9UNS2 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AL160314.3-201ENST00000556041 767 ntBASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AC140658.4-201ENST00000561990 352 ntBASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AC104758.3-203ENST00000562938 2123 ntBASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AC100827.2-201ENST00000563214 1194 ntBASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AL596325.1-201ENST00000563991 1082 ntBASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AC027307.3-201ENST00000594262 1100 ntBASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AC009884.2-201ENST00000603110 324 ntBASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AC133540.1-201ENST00000620845 1019 ntBASIC12.54□□□□□ -0.4
COPS3Q9UNS2 AL162426.1-201ENST00000624141 743 ntBASIC12.54□□□□□ -0.4
COPS3Q9UNS2 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 LINC01165-201ENST00000445190 1623 ntBASIC12.54□□□□□ -0.4
COPS3Q9UNS2 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.54□□□□□ -0.4
COPS3Q9UNS2 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms