Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 AL157407.1-201ENST00000435784 904 ntBASIC17.24■□□□□ 0.35
UPF2Q9HAU5 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 AC022217.1-201ENST00000521069 738 ntBASIC17.24■□□□□ 0.35
UPF2Q9HAU5 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 AC023511.2-201ENST00000618803 211 ntBASIC17.24■□□□□ 0.35
UPF2Q9HAU5 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF2Q9HAU5 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 AC008620.2-201ENST00000510294 1569 ntBASIC17.23■□□□□ 0.35
UPF2Q9HAU5 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 ZNF493-208ENST00000599461 1769 ntBASIC17.23■□□□□ 0.35
UPF2Q9HAU5 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 AC005229.1-201ENST00000392885 409 ntBASIC17.23■□□□□ 0.35
UPF2Q9HAU5 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 FAM207CP-201ENST00000443486 507 ntBASIC17.23■□□□□ 0.35
UPF2Q9HAU5 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 AC009955.4-201ENST00000597192 544 ntBASIC17.23■□□□□ 0.35
UPF2Q9HAU5 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 AL645937.6-201ENST00000641122 3727 ntBASIC17.23■□□□□ 0.35
UPF2Q9HAU5 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC17.23■□□□□ 0.35
UPF2Q9HAU5 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 FAM197Y7-201ENST00000432892 766 ntBASIC17.22■□□□□ 0.35
UPF2Q9HAU5 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 TSPY16P-201ENST00000449843 468 ntBASIC17.22■□□□□ 0.35
UPF2Q9HAU5 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 AC138951.2-201ENST00000623455 1161 ntBASIC17.22■□□□□ 0.35
UPF2Q9HAU5 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms