Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 IL9RP3-201ENST00000442856 1674 ntBASIC15.71■□□□□ 0.11
TNFRSF25Q93038 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 AC073210.1-201ENST00000414799 232 ntBASIC15.71■□□□□ 0.11
TNFRSF25Q93038 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 HERC2P11-201ENST00000562845 725 ntBASIC15.71■□□□□ 0.11
TNFRSF25Q93038 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 AC100756.2-201ENST00000569537 736 ntBASIC15.71■□□□□ 0.11
TNFRSF25Q93038 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 NT5C-204ENST00000578337 582 ntTSL 2 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 RPL17P45-201ENST00000586289 509 ntBASIC15.71■□□□□ 0.11
TNFRSF25Q93038 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 AC242376.2-201ENST00000619355 883 ntBASIC15.71■□□□□ 0.11
TNFRSF25Q93038 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF25Q93038 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TNFRSF25Q93038 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TNFRSF25Q93038 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TNFRSF25Q93038 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TNFRSF25Q93038 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TNFRSF25Q93038 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 CICP9-201ENST00000444451 1913 ntBASIC15.7■□□□□ 0.1
TNFRSF25Q93038 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 GDA-203ENST00000376986 1771 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 AP000911.2-201ENST00000534330 502 ntBASIC15.7■□□□□ 0.1
TNFRSF25Q93038 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 AC007881.3-201ENST00000608897 607 ntBASIC15.7■□□□□ 0.1
TNFRSF25Q93038 AL359091.4-201ENST00000610052 409 ntBASIC15.7■□□□□ 0.1
TNFRSF25Q93038 AC011491.1-203ENST00000637688 543 ntBASIC15.7■□□□□ 0.1
TNFRSF25Q93038 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 AC002350.2-201ENST00000623894 1828 ntBASIC15.7■□□□□ 0.1
TNFRSF25Q93038 AL137784.3-201ENST00000623858 2288 ntBASIC15.7■□□□□ 0.1
TNFRSF25Q93038 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF25Q93038 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms